Gene : Cagra.4082s0030 C. grandiflora v1.1
Defline:  (1 of 3) KOG4249 - Uncharacterized conserved protein Genomic Order:  30
Name:  ? Cagra.4082s0030 Secondary Identifier:  ? PAC:28896817
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4082s0030 0.5kb upstream 0.5kb upstream 4511 true Scaffold4082: 116250-120760 Capsella grandiflora
Cagra.4082s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold4082: 116250-116749 Capsella grandiflora
Cagra.4082s0030 0.5kb downstream 0.5kb downstream 4511 true Scaffold4082: 116750-121260 Capsella grandiflora
Cagra.4082s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold4082: 120761-121260 Capsella grandiflora
Cagra.4082s0030 1.0kb upstream 1.0kb upstream 5011 true Scaffold4082: 115750-120760 Capsella grandiflora
Cagra.4082s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold4082: 115750-116749 Capsella grandiflora
Cagra.4082s0030 1.0kb downstream 1.0kb downstream 5011 true Scaffold4082: 116750-121760 Capsella grandiflora
Cagra.4082s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold4082: 120761-121760 Capsella grandiflora
Cagra.4082s0030 2.0kb upstream 2.0kb upstream 6011 true Scaffold4082: 114750-120760 Capsella grandiflora
Cagra.4082s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold4082: 114750-116749 Capsella grandiflora
Cagra.4082s0030 2.0kb downstream 2.0kb downstream 6011 true Scaffold4082: 116750-122760 Capsella grandiflora
Cagra.4082s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold4082: 120761-122760 Capsella grandiflora
Cagra.4082s0030 5.0kb upstream 5.0kb upstream 9011 true Scaffold4082: 111750-120760 Capsella grandiflora
Cagra.4082s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold4082: 111750-116749 Capsella grandiflora
Cagra.4082s0030 5.0kb downstream 5.0kb downstream 9011 true Scaffold4082: 116750-125760 Capsella grandiflora
Cagra.4082s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold4082: 120761-125760 Capsella grandiflora
Cagra.4082s0030 10.0kb upstream 10.0kb upstream 14011 true Scaffold4082: 106750-120760 Capsella grandiflora
Cagra.4082s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold4082: 106750-116749 Capsella grandiflora
Cagra.4082s0030 10.0kb downstream 10.0kb downstream 14011 true Scaffold4082: 116750-130760 Capsella grandiflora
Cagra.4082s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold4082: 120761-130760 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368286 5261 Brassicaceae View MSA
123834836 5264 Brassicales-Malvales View MSA
124343967 5266 SBM View MSA
124242125 5268 Malvidae View MSA
124068028 5270 Rosid View MSA
123737832 5271 Pentapetalae View MSA
122788023 5272 Eudicot View MSA
122047870 5273 Angiosperm View MSA
121346132 5274 Embryophyte View MSA
123428813 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain