Gene : Cagra.4091s0005 C. grandiflora v1.1
Defline:  (1 of 7) PTHR24093:SF355 - ATPASE 1, PLASMA MEMBRANE-TYPE-RELATED Genomic Order:  5
Name:  ? Cagra.4091s0005 Secondary Identifier:  ? PAC:28900932
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4091s0005 0.5kb upstream 0.5kb upstream 5762 true Scaffold4091: 22692-28453 Capsella grandiflora
Cagra.4091s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold4091: 27954-28453 Capsella grandiflora
Cagra.4091s0005 0.5kb downstream 0.5kb downstream 5762 true Scaffold4091: 22192-27953 Capsella grandiflora
Cagra.4091s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold4091: 22192-22691 Capsella grandiflora
Cagra.4091s0005 1.0kb upstream 1.0kb upstream 6262 true Scaffold4091: 22692-28953 Capsella grandiflora
Cagra.4091s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold4091: 27954-28953 Capsella grandiflora
Cagra.4091s0005 1.0kb downstream 1.0kb downstream 6262 true Scaffold4091: 21692-27953 Capsella grandiflora
Cagra.4091s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold4091: 21692-22691 Capsella grandiflora
Cagra.4091s0005 2.0kb upstream 2.0kb upstream 7262 true Scaffold4091: 22692-29953 Capsella grandiflora
Cagra.4091s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold4091: 27954-29953 Capsella grandiflora
Cagra.4091s0005 2.0kb downstream 2.0kb downstream 7262 true Scaffold4091: 20692-27953 Capsella grandiflora
Cagra.4091s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold4091: 20692-22691 Capsella grandiflora
Cagra.4091s0005 5.0kb upstream 5.0kb upstream 10262 true Scaffold4091: 22692-32953 Capsella grandiflora
Cagra.4091s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold4091: 27954-32953 Capsella grandiflora
Cagra.4091s0005 5.0kb downstream 5.0kb downstream 10262 true Scaffold4091: 17692-27953 Capsella grandiflora
Cagra.4091s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold4091: 17692-22691 Capsella grandiflora
Cagra.4091s0005 10.0kb upstream 10.0kb upstream 15262 true Scaffold4091: 22692-37953 Capsella grandiflora
Cagra.4091s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold4091: 27954-37953 Capsella grandiflora
Cagra.4091s0005 10.0kb downstream 10.0kb downstream 15262 true Scaffold4091: 12692-27953 Capsella grandiflora
Cagra.4091s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold4091: 12692-22691 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367107 5261 Brassicaceae View MSA
123837278 5264 Brassicales-Malvales View MSA
124346754 5266 SBM View MSA
124237078 5268 Malvidae View MSA
124073310 5270 Rosid View MSA
123751017 5271 Pentapetalae View MSA
122796712 5272 Eudicot View MSA
122050656 5273 Angiosperm View MSA
121349531 5274 Embryophyte View MSA
123428375 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain