Gene : Cagra.4091s0002 C. grandiflora v1.1
Defline:  (1 of 6) KOG4210 - Nuclear localization sequence binding protein Genomic Order:  2
Name:  ? Cagra.4091s0002 Secondary Identifier:  ? PAC:28900948
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4091s0002 0.5kb upstream 0.5kb upstream 1860 true Scaffold4091: 8195-10054 Capsella grandiflora
Cagra.4091s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold4091: 8195-8694 Capsella grandiflora
Cagra.4091s0002 0.5kb downstream 0.5kb downstream 1860 true Scaffold4091: 8695-10554 Capsella grandiflora
Cagra.4091s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold4091: 10055-10554 Capsella grandiflora
Cagra.4091s0002 1.0kb upstream 1.0kb upstream 2360 true Scaffold4091: 7695-10054 Capsella grandiflora
Cagra.4091s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold4091: 7695-8694 Capsella grandiflora
Cagra.4091s0002 1.0kb downstream 1.0kb downstream 2360 true Scaffold4091: 8695-11054 Capsella grandiflora
Cagra.4091s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold4091: 10055-11054 Capsella grandiflora
Cagra.4091s0002 2.0kb upstream 2.0kb upstream 3360 true Scaffold4091: 6695-10054 Capsella grandiflora
Cagra.4091s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold4091: 6695-8694 Capsella grandiflora
Cagra.4091s0002 2.0kb downstream 2.0kb downstream 3360 true Scaffold4091: 8695-12054 Capsella grandiflora
Cagra.4091s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold4091: 10055-12054 Capsella grandiflora
Cagra.4091s0002 5.0kb upstream 5.0kb upstream 6360 true Scaffold4091: 3695-10054 Capsella grandiflora
Cagra.4091s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold4091: 3695-8694 Capsella grandiflora
Cagra.4091s0002 5.0kb downstream 5.0kb downstream 6360 true Scaffold4091: 8695-15054 Capsella grandiflora
Cagra.4091s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold4091: 10055-15054 Capsella grandiflora
Cagra.4091s0002 10.0kb upstream 10.0kb upstream 10054 true Scaffold4091: 1-10054 Capsella grandiflora
Cagra.4091s0002 10.0kb upstream 10.0kb upstream 8694 false Scaffold4091: 1-8694 Capsella grandiflora
Cagra.4091s0002 10.0kb downstream 10.0kb downstream 11360 true Scaffold4091: 8695-20054 Capsella grandiflora
Cagra.4091s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold4091: 10055-20054 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374494 5261 Brassicaceae View MSA
123839784 5264 Brassicales-Malvales View MSA
124339869 5266 SBM View MSA
124240217 5268 Malvidae View MSA
124073075 5270 Rosid View MSA
123744259 5271 Pentapetalae View MSA
122795127 5272 Eudicot View MSA
122049442 5273 Angiosperm View MSA
121350445 5274 Embryophyte View MSA
123381735 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain