Gene : Cagra.4093s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR13856:SF78 - ENTH/VHS/GAT FAMILY PROTEIN Genomic Order:  5
Name:  ? Cagra.4093s0005 Secondary Identifier:  ? PAC:28897233
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4093s0005 0.5kb upstream 0.5kb upstream 5408 true Scaffold4093: 12304-17711 Capsella grandiflora
Cagra.4093s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold4093: 12304-12803 Capsella grandiflora
Cagra.4093s0005 0.5kb downstream 0.5kb downstream 5408 true Scaffold4093: 12804-18211 Capsella grandiflora
Cagra.4093s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold4093: 17712-18211 Capsella grandiflora
Cagra.4093s0005 1.0kb upstream 1.0kb upstream 5908 true Scaffold4093: 11804-17711 Capsella grandiflora
Cagra.4093s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold4093: 11804-12803 Capsella grandiflora
Cagra.4093s0005 1.0kb downstream 1.0kb downstream 5908 true Scaffold4093: 12804-18711 Capsella grandiflora
Cagra.4093s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold4093: 17712-18711 Capsella grandiflora
Cagra.4093s0005 2.0kb upstream 2.0kb upstream 6908 true Scaffold4093: 10804-17711 Capsella grandiflora
Cagra.4093s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold4093: 10804-12803 Capsella grandiflora
Cagra.4093s0005 2.0kb downstream 2.0kb downstream 6908 true Scaffold4093: 12804-19711 Capsella grandiflora
Cagra.4093s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold4093: 17712-19711 Capsella grandiflora
Cagra.4093s0005 5.0kb upstream 5.0kb upstream 9908 true Scaffold4093: 7804-17711 Capsella grandiflora
Cagra.4093s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold4093: 7804-12803 Capsella grandiflora
Cagra.4093s0005 5.0kb downstream 5.0kb downstream 9908 true Scaffold4093: 12804-22711 Capsella grandiflora
Cagra.4093s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold4093: 17712-22711 Capsella grandiflora
Cagra.4093s0005 10.0kb upstream 10.0kb upstream 14908 true Scaffold4093: 2804-17711 Capsella grandiflora
Cagra.4093s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold4093: 2804-12803 Capsella grandiflora
Cagra.4093s0005 10.0kb downstream 10.0kb downstream 14908 true Scaffold4093: 12804-27711 Capsella grandiflora
Cagra.4093s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold4093: 17712-27711 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372293 5261 Brassicaceae View MSA
123831576 5264 Brassicales-Malvales View MSA
124337103 5266 SBM View MSA
124250612 5268 Malvidae View MSA
124064197 5270 Rosid View MSA
123738981 5271 Pentapetalae View MSA
122792508 5272 Eudicot View MSA
122051153 5273 Angiosperm View MSA
121349159 5274 Embryophyte View MSA
123427882 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain