Gene : Cagra.4093s0013 C. grandiflora v1.1
Defline:  (1 of 4) PTHR13697:SF7 - 6-PHOSPHOFRUCTOKINASE 1-RELATED Genomic Order:  13
Name:  ? Cagra.4093s0013 Secondary Identifier:  ? PAC:28897248
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ANAEROFRUCAT-PWY Capsella grandiflora pathologic  
Cgrandiflora ANAGLYCOLYSIS-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-1042 Capsella grandiflora pathologic  
Cgrandiflora PWY-5464 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4093s0013 0.5kb upstream 0.5kb upstream 4035 true Scaffold4093: 59938-63972 Capsella grandiflora
Cagra.4093s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold4093: 63473-63972 Capsella grandiflora
Cagra.4093s0013 0.5kb downstream 0.5kb downstream 4035 true Scaffold4093: 59438-63472 Capsella grandiflora
Cagra.4093s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold4093: 59438-59937 Capsella grandiflora
Cagra.4093s0013 1.0kb upstream 1.0kb upstream 4535 true Scaffold4093: 59938-64472 Capsella grandiflora
Cagra.4093s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold4093: 63473-64472 Capsella grandiflora
Cagra.4093s0013 1.0kb downstream 1.0kb downstream 4535 true Scaffold4093: 58938-63472 Capsella grandiflora
Cagra.4093s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold4093: 58938-59937 Capsella grandiflora
Cagra.4093s0013 2.0kb upstream 2.0kb upstream 5535 true Scaffold4093: 59938-65472 Capsella grandiflora
Cagra.4093s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold4093: 63473-65472 Capsella grandiflora
Cagra.4093s0013 2.0kb downstream 2.0kb downstream 5535 true Scaffold4093: 57938-63472 Capsella grandiflora
Cagra.4093s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold4093: 57938-59937 Capsella grandiflora
Cagra.4093s0013 5.0kb upstream 5.0kb upstream 8535 true Scaffold4093: 59938-68472 Capsella grandiflora
Cagra.4093s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold4093: 63473-68472 Capsella grandiflora
Cagra.4093s0013 5.0kb downstream 5.0kb downstream 8535 true Scaffold4093: 54938-63472 Capsella grandiflora
Cagra.4093s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold4093: 54938-59937 Capsella grandiflora
Cagra.4093s0013 10.0kb upstream 10.0kb upstream 13535 true Scaffold4093: 59938-73472 Capsella grandiflora
Cagra.4093s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold4093: 63473-73472 Capsella grandiflora
Cagra.4093s0013 10.0kb downstream 10.0kb downstream 13535 true Scaffold4093: 49938-63472 Capsella grandiflora
Cagra.4093s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold4093: 49938-59937 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041124 5273 Angiosperm View MSA
122367046 5261 Brassicaceae View MSA
123799285 5264 Brassicales-Malvales View MSA
124296821 5266 SBM View MSA
124246868 5268 Malvidae View MSA
124069245 5270 Rosid View MSA
123747020 5271 Pentapetalae View MSA
122788773 5272 Eudicot View MSA
121349898 5274 Embryophyte View MSA
123428795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain