Gene : Cagra.4031s0009 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31358:SF4 - PROTEIN WAVE-DAMPENED 2-RELATED Genomic Order:  9
Name:  ? Cagra.4031s0009 Secondary Identifier:  ? PAC:28904361
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4031s0009 0.5kb upstream 0.5kb upstream 2721 true Scaffold4031: 21610-24330 Capsella grandiflora
Cagra.4031s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold4031: 23831-24330 Capsella grandiflora
Cagra.4031s0009 0.5kb downstream 0.5kb downstream 2721 true Scaffold4031: 21110-23830 Capsella grandiflora
Cagra.4031s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold4031: 21110-21609 Capsella grandiflora
Cagra.4031s0009 1.0kb upstream 1.0kb upstream 3221 true Scaffold4031: 21610-24830 Capsella grandiflora
Cagra.4031s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold4031: 23831-24830 Capsella grandiflora
Cagra.4031s0009 1.0kb downstream 1.0kb downstream 3221 true Scaffold4031: 20610-23830 Capsella grandiflora
Cagra.4031s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold4031: 20610-21609 Capsella grandiflora
Cagra.4031s0009 2.0kb upstream 2.0kb upstream 4221 true Scaffold4031: 21610-25830 Capsella grandiflora
Cagra.4031s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold4031: 23831-25830 Capsella grandiflora
Cagra.4031s0009 2.0kb downstream 2.0kb downstream 4221 true Scaffold4031: 19610-23830 Capsella grandiflora
Cagra.4031s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold4031: 19610-21609 Capsella grandiflora
Cagra.4031s0009 5.0kb upstream 5.0kb upstream 7221 true Scaffold4031: 21610-28830 Capsella grandiflora
Cagra.4031s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold4031: 23831-28830 Capsella grandiflora
Cagra.4031s0009 5.0kb downstream 5.0kb downstream 7221 true Scaffold4031: 16610-23830 Capsella grandiflora
Cagra.4031s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold4031: 16610-21609 Capsella grandiflora
Cagra.4031s0009 10.0kb upstream 10.0kb upstream 12221 true Scaffold4031: 21610-33830 Capsella grandiflora
Cagra.4031s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold4031: 23831-33830 Capsella grandiflora
Cagra.4031s0009 10.0kb downstream 10.0kb downstream 12221 true Scaffold4031: 11610-23830 Capsella grandiflora
Cagra.4031s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold4031: 11610-21609 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360580 5261 Brassicaceae View MSA
123797982 5264 Brassicales-Malvales View MSA
124295673 5266 SBM View MSA
124148049 5268 Malvidae View MSA
124062203 5270 Rosid View MSA
123749584 5271 Pentapetalae View MSA
122790813 5272 Eudicot View MSA
122045686 5273 Angiosperm View MSA
121351484 5274 Embryophyte View MSA
123382183 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain