Gene : Cagra.4031s0016 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31500:SF22 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Genomic Order:  16
Name:  ? Cagra.4031s0016 Secondary Identifier:  ? PAC:28904353
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4031s0016 0.5kb upstream 0.5kb upstream 3162 true Scaffold4031: 43328-46489 Capsella grandiflora
Cagra.4031s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold4031: 43328-43827 Capsella grandiflora
Cagra.4031s0016 0.5kb downstream 0.5kb downstream 3162 true Scaffold4031: 43828-46989 Capsella grandiflora
Cagra.4031s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold4031: 46490-46989 Capsella grandiflora
Cagra.4031s0016 1.0kb upstream 1.0kb upstream 3662 true Scaffold4031: 42828-46489 Capsella grandiflora
Cagra.4031s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold4031: 42828-43827 Capsella grandiflora
Cagra.4031s0016 1.0kb downstream 1.0kb downstream 3662 true Scaffold4031: 43828-47489 Capsella grandiflora
Cagra.4031s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold4031: 46490-47489 Capsella grandiflora
Cagra.4031s0016 2.0kb upstream 2.0kb upstream 4662 true Scaffold4031: 41828-46489 Capsella grandiflora
Cagra.4031s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold4031: 41828-43827 Capsella grandiflora
Cagra.4031s0016 2.0kb downstream 2.0kb downstream 4662 true Scaffold4031: 43828-48489 Capsella grandiflora
Cagra.4031s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold4031: 46490-48489 Capsella grandiflora
Cagra.4031s0016 5.0kb upstream 5.0kb upstream 7662 true Scaffold4031: 38828-46489 Capsella grandiflora
Cagra.4031s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold4031: 38828-43827 Capsella grandiflora
Cagra.4031s0016 5.0kb downstream 5.0kb downstream 7662 true Scaffold4031: 43828-51489 Capsella grandiflora
Cagra.4031s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold4031: 46490-51489 Capsella grandiflora
Cagra.4031s0016 10.0kb upstream 10.0kb upstream 12662 true Scaffold4031: 33828-46489 Capsella grandiflora
Cagra.4031s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold4031: 33828-43827 Capsella grandiflora
Cagra.4031s0016 10.0kb downstream 10.0kb downstream 12662 true Scaffold4031: 43828-56489 Capsella grandiflora
Cagra.4031s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold4031: 46490-56489 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369222 5261 Brassicaceae View MSA
123828760 5264 Brassicales-Malvales View MSA
124345401 5266 SBM View MSA
124240427 5268 Malvidae View MSA
124063425 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain