Gene : Cagra.4033s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11599:SF44 - AT05866P-RELATED Genomic Order:  3
Name:  ? Cagra.4033s0003 Secondary Identifier:  ? PAC:28914998
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4033s0003 0.5kb upstream 0.5kb upstream 3408 true Scaffold4033: 12998-16405 Capsella grandiflora
Cagra.4033s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold4033: 12998-13497 Capsella grandiflora
Cagra.4033s0003 0.5kb downstream 0.5kb downstream 2909 true Scaffold4033: 13498-16406 Capsella grandiflora
Cagra.4033s0003 0.5kb downstream 0.5kb downstream 1 false Scaffold4033: 16406-16406 Capsella grandiflora
Cagra.4033s0003 1.0kb upstream 1.0kb upstream 3908 true Scaffold4033: 12498-16405 Capsella grandiflora
Cagra.4033s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold4033: 12498-13497 Capsella grandiflora
Cagra.4033s0003 1.0kb downstream 1.0kb downstream 2909 true Scaffold4033: 13498-16406 Capsella grandiflora
Cagra.4033s0003 1.0kb downstream 1.0kb downstream 1 false Scaffold4033: 16406-16406 Capsella grandiflora
Cagra.4033s0003 2.0kb upstream 2.0kb upstream 4908 true Scaffold4033: 11498-16405 Capsella grandiflora
Cagra.4033s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold4033: 11498-13497 Capsella grandiflora
Cagra.4033s0003 2.0kb downstream 2.0kb downstream 2909 true Scaffold4033: 13498-16406 Capsella grandiflora
Cagra.4033s0003 2.0kb downstream 2.0kb downstream 1 false Scaffold4033: 16406-16406 Capsella grandiflora
Cagra.4033s0003 5.0kb upstream 5.0kb upstream 7908 true Scaffold4033: 8498-16405 Capsella grandiflora
Cagra.4033s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold4033: 8498-13497 Capsella grandiflora
Cagra.4033s0003 5.0kb downstream 5.0kb downstream 2909 true Scaffold4033: 13498-16406 Capsella grandiflora
Cagra.4033s0003 5.0kb downstream 5.0kb downstream 1 false Scaffold4033: 16406-16406 Capsella grandiflora
Cagra.4033s0003 10.0kb upstream 10.0kb upstream 12908 true Scaffold4033: 3498-16405 Capsella grandiflora
Cagra.4033s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold4033: 3498-13497 Capsella grandiflora
Cagra.4033s0003 10.0kb downstream 10.0kb downstream 2909 true Scaffold4033: 13498-16406 Capsella grandiflora
Cagra.4033s0003 10.0kb downstream 10.0kb downstream 1 false Scaffold4033: 16406-16406 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379036 5261 Brassicaceae View MSA
123835815 5264 Brassicales-Malvales View MSA
124339943 5266 SBM View MSA
124250164 5268 Malvidae View MSA
124068414 5270 Rosid View MSA
123741626 5271 Pentapetalae View MSA
122791529 5272 Eudicot View MSA
122044659 5273 Angiosperm View MSA
121345810 5274 Embryophyte View MSA
123428515 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain