Gene : Cagra.4063s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31414:SF1 - TRANSMEMBRANE PROTEIN DDB_G0292058 Genomic Order:  1
Name:  ? Cagra.4063s0001 Secondary Identifier:  ? PAC:28910514
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4063s0001 0.5kb upstream 0.5kb upstream 3385 true Scaffold4063: 1-3385 Capsella grandiflora
Cagra.4063s0001 0.5kb upstream 0.5kb upstream 221 false Scaffold4063: 1-221 Capsella grandiflora
Cagra.4063s0001 0.5kb downstream 0.5kb downstream 3664 true Scaffold4063: 222-3885 Capsella grandiflora
Cagra.4063s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold4063: 3386-3885 Capsella grandiflora
Cagra.4063s0001 1.0kb upstream 1.0kb upstream 3385 true Scaffold4063: 1-3385 Capsella grandiflora
Cagra.4063s0001 1.0kb upstream 1.0kb upstream 221 false Scaffold4063: 1-221 Capsella grandiflora
Cagra.4063s0001 1.0kb downstream 1.0kb downstream 4164 true Scaffold4063: 222-4385 Capsella grandiflora
Cagra.4063s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold4063: 3386-4385 Capsella grandiflora
Cagra.4063s0001 2.0kb upstream 2.0kb upstream 3385 true Scaffold4063: 1-3385 Capsella grandiflora
Cagra.4063s0001 2.0kb upstream 2.0kb upstream 221 false Scaffold4063: 1-221 Capsella grandiflora
Cagra.4063s0001 2.0kb downstream 2.0kb downstream 5164 true Scaffold4063: 222-5385 Capsella grandiflora
Cagra.4063s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold4063: 3386-5385 Capsella grandiflora
Cagra.4063s0001 5.0kb upstream 5.0kb upstream 3385 true Scaffold4063: 1-3385 Capsella grandiflora
Cagra.4063s0001 5.0kb upstream 5.0kb upstream 221 false Scaffold4063: 1-221 Capsella grandiflora
Cagra.4063s0001 5.0kb downstream 5.0kb downstream 8164 true Scaffold4063: 222-8385 Capsella grandiflora
Cagra.4063s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold4063: 3386-8385 Capsella grandiflora
Cagra.4063s0001 10.0kb upstream 10.0kb upstream 3385 true Scaffold4063: 1-3385 Capsella grandiflora
Cagra.4063s0001 10.0kb upstream 10.0kb upstream 221 false Scaffold4063: 1-221 Capsella grandiflora
Cagra.4063s0001 10.0kb downstream 10.0kb downstream 13164 true Scaffold4063: 222-13385 Capsella grandiflora
Cagra.4063s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold4063: 3386-13385 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378583 5261 Brassicaceae View MSA
123839550 5264 Brassicales-Malvales View MSA
124344666 5266 SBM View MSA
124246122 5268 Malvidae View MSA
124069186 5270 Rosid View MSA
123747530 5271 Pentapetalae View MSA
122793265 5272 Eudicot View MSA
122043467 5273 Angiosperm View MSA
123429125 5275 Viridiplantae View MSA
121350323 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain