Gene : Cagra.4063s0006 C. grandiflora v1.1
Defline:  (1 of 15) PTHR23273:SF4 - REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT Genomic Order:  6
Name:  ? Cagra.4063s0006 Secondary Identifier:  ? PAC:28910518
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4063s0006 0.5kb upstream 0.5kb upstream 890 true Scaffold4063: 25813-26702 Capsella grandiflora
Cagra.4063s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold4063: 25813-26312 Capsella grandiflora
Cagra.4063s0006 0.5kb downstream 0.5kb downstream 890 true Scaffold4063: 26313-27202 Capsella grandiflora
Cagra.4063s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold4063: 26703-27202 Capsella grandiflora
Cagra.4063s0006 1.0kb upstream 1.0kb upstream 1390 true Scaffold4063: 25313-26702 Capsella grandiflora
Cagra.4063s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold4063: 25313-26312 Capsella grandiflora
Cagra.4063s0006 1.0kb downstream 1.0kb downstream 1390 true Scaffold4063: 26313-27702 Capsella grandiflora
Cagra.4063s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold4063: 26703-27702 Capsella grandiflora
Cagra.4063s0006 2.0kb upstream 2.0kb upstream 2390 true Scaffold4063: 24313-26702 Capsella grandiflora
Cagra.4063s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold4063: 24313-26312 Capsella grandiflora
Cagra.4063s0006 2.0kb downstream 2.0kb downstream 2390 true Scaffold4063: 26313-28702 Capsella grandiflora
Cagra.4063s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold4063: 26703-28702 Capsella grandiflora
Cagra.4063s0006 5.0kb upstream 5.0kb upstream 5390 true Scaffold4063: 21313-26702 Capsella grandiflora
Cagra.4063s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold4063: 21313-26312 Capsella grandiflora
Cagra.4063s0006 5.0kb downstream 5.0kb downstream 3473 true Scaffold4063: 26313-29785 Capsella grandiflora
Cagra.4063s0006 5.0kb downstream 5.0kb downstream 3083 false Scaffold4063: 26703-29785 Capsella grandiflora
Cagra.4063s0006 10.0kb upstream 10.0kb upstream 10390 true Scaffold4063: 16313-26702 Capsella grandiflora
Cagra.4063s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold4063: 16313-26312 Capsella grandiflora
Cagra.4063s0006 10.0kb downstream 10.0kb downstream 3473 true Scaffold4063: 26313-29785 Capsella grandiflora
Cagra.4063s0006 10.0kb downstream 10.0kb downstream 3083 false Scaffold4063: 26703-29785 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
122333700 5261 Brassicaceae Singleton cluster - no MSA
123774615 5264 Brassicales-Malvales Singleton cluster - no MSA
124273048 5266 SBM Singleton cluster - no MSA
124128755 5268 Malvidae Singleton cluster - no MSA
124073687 5270 Rosid View MSA
123753150 5271 Pentapetalae View MSA
122797947 5272 Eudicot View MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain