Gene : Cagra.4079s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR15629:SF2 - SH3 DOMAIN-CONTAINING YSC84-LIKE PROTEIN 1 Genomic Order:  2
Name:  ? Cagra.4079s0002 Secondary Identifier:  ? PAC:28910646
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4079s0002 0.5kb upstream 0.5kb upstream 2435 true Scaffold4079: 9092-11526 Capsella grandiflora
Cagra.4079s0002 0.5kb upstream 0.5kb upstream 389 false Scaffold4079: 11138-11526 Capsella grandiflora
Cagra.4079s0002 0.5kb downstream 0.5kb downstream 2546 true Scaffold4079: 8592-11137 Capsella grandiflora
Cagra.4079s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold4079: 8592-9091 Capsella grandiflora
Cagra.4079s0002 1.0kb upstream 1.0kb upstream 2435 true Scaffold4079: 9092-11526 Capsella grandiflora
Cagra.4079s0002 1.0kb upstream 1.0kb upstream 389 false Scaffold4079: 11138-11526 Capsella grandiflora
Cagra.4079s0002 1.0kb downstream 1.0kb downstream 3046 true Scaffold4079: 8092-11137 Capsella grandiflora
Cagra.4079s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold4079: 8092-9091 Capsella grandiflora
Cagra.4079s0002 2.0kb upstream 2.0kb upstream 2435 true Scaffold4079: 9092-11526 Capsella grandiflora
Cagra.4079s0002 2.0kb upstream 2.0kb upstream 389 false Scaffold4079: 11138-11526 Capsella grandiflora
Cagra.4079s0002 2.0kb downstream 2.0kb downstream 4046 true Scaffold4079: 7092-11137 Capsella grandiflora
Cagra.4079s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold4079: 7092-9091 Capsella grandiflora
Cagra.4079s0002 5.0kb upstream 5.0kb upstream 2435 true Scaffold4079: 9092-11526 Capsella grandiflora
Cagra.4079s0002 5.0kb upstream 5.0kb upstream 389 false Scaffold4079: 11138-11526 Capsella grandiflora
Cagra.4079s0002 5.0kb downstream 5.0kb downstream 7046 true Scaffold4079: 4092-11137 Capsella grandiflora
Cagra.4079s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold4079: 4092-9091 Capsella grandiflora
Cagra.4079s0002 10.0kb upstream 10.0kb upstream 2435 true Scaffold4079: 9092-11526 Capsella grandiflora
Cagra.4079s0002 10.0kb upstream 10.0kb upstream 389 false Scaffold4079: 11138-11526 Capsella grandiflora
Cagra.4079s0002 10.0kb downstream 10.0kb downstream 11137 true Scaffold4079: 1-11137 Capsella grandiflora
Cagra.4079s0002 10.0kb downstream 10.0kb downstream 9091 false Scaffold4079: 1-9091 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361156 5261 Brassicaceae View MSA
123835930 5264 Brassicales-Malvales View MSA
124336872 5266 SBM View MSA
124243314 5268 Malvidae View MSA
124061750 5270 Rosid View MSA
123737814 5271 Pentapetalae View MSA
122792588 5272 Eudicot View MSA
122046278 5273 Angiosperm View MSA
121345874 5274 Embryophyte View MSA
123426176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain