Gene : Cagra.4077s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31071:SF9 - INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-LIKE PROTEIN Genomic Order:  2
Name:  ? Cagra.4077s0002 Secondary Identifier:  ? PAC:28895034
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4077s0002 0.5kb upstream 0.5kb upstream 3209 true Scaffold4077: 7221-10429 Capsella grandiflora
Cagra.4077s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold4077: 7221-7720 Capsella grandiflora
Cagra.4077s0002 0.5kb downstream 0.5kb downstream 3209 true Scaffold4077: 7721-10929 Capsella grandiflora
Cagra.4077s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold4077: 10430-10929 Capsella grandiflora
Cagra.4077s0002 1.0kb upstream 1.0kb upstream 3709 true Scaffold4077: 6721-10429 Capsella grandiflora
Cagra.4077s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold4077: 6721-7720 Capsella grandiflora
Cagra.4077s0002 1.0kb downstream 1.0kb downstream 3709 true Scaffold4077: 7721-11429 Capsella grandiflora
Cagra.4077s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold4077: 10430-11429 Capsella grandiflora
Cagra.4077s0002 2.0kb upstream 2.0kb upstream 4709 true Scaffold4077: 5721-10429 Capsella grandiflora
Cagra.4077s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold4077: 5721-7720 Capsella grandiflora
Cagra.4077s0002 2.0kb downstream 2.0kb downstream 4709 true Scaffold4077: 7721-12429 Capsella grandiflora
Cagra.4077s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold4077: 10430-12429 Capsella grandiflora
Cagra.4077s0002 5.0kb upstream 5.0kb upstream 7709 true Scaffold4077: 2721-10429 Capsella grandiflora
Cagra.4077s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold4077: 2721-7720 Capsella grandiflora
Cagra.4077s0002 5.0kb downstream 5.0kb downstream 7709 true Scaffold4077: 7721-15429 Capsella grandiflora
Cagra.4077s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold4077: 10430-15429 Capsella grandiflora
Cagra.4077s0002 10.0kb upstream 10.0kb upstream 10429 true Scaffold4077: 1-10429 Capsella grandiflora
Cagra.4077s0002 10.0kb upstream 10.0kb upstream 7720 false Scaffold4077: 1-7720 Capsella grandiflora
Cagra.4077s0002 10.0kb downstream 10.0kb downstream 10231 true Scaffold4077: 7721-17951 Capsella grandiflora
Cagra.4077s0002 10.0kb downstream 10.0kb downstream 7522 false Scaffold4077: 10430-17951 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376488 5261 Brassicaceae View MSA
123828881 5264 Brassicales-Malvales View MSA
124346118 5266 SBM View MSA
124244128 5268 Malvidae View MSA
124072871 5270 Rosid View MSA
123736575 5271 Pentapetalae View MSA
122797498 5272 Eudicot View MSA
122044970 5273 Angiosperm View MSA
121310375 5274 Embryophyte View MSA
123347876 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain