Gene : Cagra.4082s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12526//PTHR12526:SF340 - GLYCOSYLTRANSFERASE Genomic Order:  1
Name:  ? Cagra.4082s0001 Secondary Identifier:  ? PAC:28896801
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4082s0001 0.5kb upstream 0.5kb upstream 2977 true Scaffold4082: 7779-10755 Capsella grandiflora
Cagra.4082s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold4082: 10256-10755 Capsella grandiflora
Cagra.4082s0001 0.5kb downstream 0.5kb downstream 2977 true Scaffold4082: 7279-10255 Capsella grandiflora
Cagra.4082s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold4082: 7279-7778 Capsella grandiflora
Cagra.4082s0001 1.0kb upstream 1.0kb upstream 3477 true Scaffold4082: 7779-11255 Capsella grandiflora
Cagra.4082s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold4082: 10256-11255 Capsella grandiflora
Cagra.4082s0001 1.0kb downstream 1.0kb downstream 3477 true Scaffold4082: 6779-10255 Capsella grandiflora
Cagra.4082s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold4082: 6779-7778 Capsella grandiflora
Cagra.4082s0001 2.0kb upstream 2.0kb upstream 4477 true Scaffold4082: 7779-12255 Capsella grandiflora
Cagra.4082s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold4082: 10256-12255 Capsella grandiflora
Cagra.4082s0001 2.0kb downstream 2.0kb downstream 4477 true Scaffold4082: 5779-10255 Capsella grandiflora
Cagra.4082s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold4082: 5779-7778 Capsella grandiflora
Cagra.4082s0001 5.0kb upstream 5.0kb upstream 7477 true Scaffold4082: 7779-15255 Capsella grandiflora
Cagra.4082s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold4082: 10256-15255 Capsella grandiflora
Cagra.4082s0001 5.0kb downstream 5.0kb downstream 7477 true Scaffold4082: 2779-10255 Capsella grandiflora
Cagra.4082s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold4082: 2779-7778 Capsella grandiflora
Cagra.4082s0001 10.0kb upstream 10.0kb upstream 12477 true Scaffold4082: 7779-20255 Capsella grandiflora
Cagra.4082s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold4082: 10256-20255 Capsella grandiflora
Cagra.4082s0001 10.0kb downstream 10.0kb downstream 10255 true Scaffold4082: 1-10255 Capsella grandiflora
Cagra.4082s0001 10.0kb downstream 10.0kb downstream 7778 false Scaffold4082: 1-7778 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338280 5261 Brassicaceae View MSA
123837142 5264 Brassicales-Malvales View MSA
124345613 5266 SBM View MSA
124241184 5268 Malvidae View MSA
124066463 5270 Rosid View MSA
123749252 5271 Pentapetalae View MSA
122792766 5272 Eudicot View MSA
122049037 5273 Angiosperm View MSA
123429006 5275 Viridiplantae View MSA
121344163 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain