Gene : Cagra.3976s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23201:SF15 - GIBBERELLIN-REGULATED PROTEIN 7 Genomic Order:  2
Name:  ? Cagra.3976s0002 Secondary Identifier:  ? PAC:28894994
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3976s0002 0.5kb upstream 0.5kb upstream 1535 true Scaffold3976: 6358-7892 Capsella grandiflora
Cagra.3976s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold3976: 7393-7892 Capsella grandiflora
Cagra.3976s0002 0.5kb downstream 0.5kb downstream 1535 true Scaffold3976: 5858-7392 Capsella grandiflora
Cagra.3976s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold3976: 5858-6357 Capsella grandiflora
Cagra.3976s0002 1.0kb upstream 1.0kb upstream 2035 true Scaffold3976: 6358-8392 Capsella grandiflora
Cagra.3976s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold3976: 7393-8392 Capsella grandiflora
Cagra.3976s0002 1.0kb downstream 1.0kb downstream 2035 true Scaffold3976: 5358-7392 Capsella grandiflora
Cagra.3976s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold3976: 5358-6357 Capsella grandiflora
Cagra.3976s0002 2.0kb upstream 2.0kb upstream 3035 true Scaffold3976: 6358-9392 Capsella grandiflora
Cagra.3976s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold3976: 7393-9392 Capsella grandiflora
Cagra.3976s0002 2.0kb downstream 2.0kb downstream 3035 true Scaffold3976: 4358-7392 Capsella grandiflora
Cagra.3976s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold3976: 4358-6357 Capsella grandiflora
Cagra.3976s0002 5.0kb upstream 5.0kb upstream 6035 true Scaffold3976: 6358-12392 Capsella grandiflora
Cagra.3976s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold3976: 7393-12392 Capsella grandiflora
Cagra.3976s0002 5.0kb downstream 5.0kb downstream 6035 true Scaffold3976: 1358-7392 Capsella grandiflora
Cagra.3976s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold3976: 1358-6357 Capsella grandiflora
Cagra.3976s0002 10.0kb upstream 10.0kb upstream 11035 true Scaffold3976: 6358-17392 Capsella grandiflora
Cagra.3976s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold3976: 7393-17392 Capsella grandiflora
Cagra.3976s0002 10.0kb downstream 10.0kb downstream 7392 true Scaffold3976: 1-7392 Capsella grandiflora
Cagra.3976s0002 10.0kb downstream 10.0kb downstream 6357 false Scaffold3976: 1-6357 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363211 5261 Brassicaceae View MSA
123840450 5264 Brassicales-Malvales View MSA
124322721 5266 SBM View MSA
124252864 5268 Malvidae View MSA
124074083 5270 Rosid View MSA
123750435 5271 Pentapetalae View MSA
122791253 5272 Eudicot View MSA
122044591 5273 Angiosperm View MSA
121310316 5274 Embryophyte View MSA
123347833 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain