Gene : Cagra.4003s0030 C. grandiflora v1.1
Defline:  (1 of 2) PTHR18937:SF9 - STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2 Genomic Order:  30
Name:  ? Cagra.4003s0030 Secondary Identifier:  ? PAC:28894841
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4003s0030 0.5kb upstream 0.5kb upstream 7086 true Scaffold4003: 119528-126613 Capsella grandiflora
Cagra.4003s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold4003: 119528-120027 Capsella grandiflora
Cagra.4003s0030 0.5kb downstream 0.5kb downstream 7086 true Scaffold4003: 120028-127113 Capsella grandiflora
Cagra.4003s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold4003: 126614-127113 Capsella grandiflora
Cagra.4003s0030 1.0kb upstream 1.0kb upstream 7586 true Scaffold4003: 119028-126613 Capsella grandiflora
Cagra.4003s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold4003: 119028-120027 Capsella grandiflora
Cagra.4003s0030 1.0kb downstream 1.0kb downstream 7586 true Scaffold4003: 120028-127613 Capsella grandiflora
Cagra.4003s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold4003: 126614-127613 Capsella grandiflora
Cagra.4003s0030 2.0kb upstream 2.0kb upstream 8586 true Scaffold4003: 118028-126613 Capsella grandiflora
Cagra.4003s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold4003: 118028-120027 Capsella grandiflora
Cagra.4003s0030 2.0kb downstream 2.0kb downstream 8586 true Scaffold4003: 120028-128613 Capsella grandiflora
Cagra.4003s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold4003: 126614-128613 Capsella grandiflora
Cagra.4003s0030 5.0kb upstream 5.0kb upstream 11586 true Scaffold4003: 115028-126613 Capsella grandiflora
Cagra.4003s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold4003: 115028-120027 Capsella grandiflora
Cagra.4003s0030 5.0kb downstream 5.0kb downstream 11586 true Scaffold4003: 120028-131613 Capsella grandiflora
Cagra.4003s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold4003: 126614-131613 Capsella grandiflora
Cagra.4003s0030 10.0kb upstream 10.0kb upstream 16586 true Scaffold4003: 110028-126613 Capsella grandiflora
Cagra.4003s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold4003: 110028-120027 Capsella grandiflora
Cagra.4003s0030 10.0kb downstream 10.0kb downstream 16586 true Scaffold4003: 120028-136613 Capsella grandiflora
Cagra.4003s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold4003: 126614-136613 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373503 5261 Brassicaceae View MSA
123836055 5264 Brassicales-Malvales View MSA
124345038 5266 SBM View MSA
124237129 5268 Malvidae View MSA
124060977 5270 Rosid View MSA
123743614 5271 Pentapetalae View MSA
122788228 5272 Eudicot View MSA
122047699 5273 Angiosperm View MSA
121347221 5274 Embryophyte View MSA
123426033 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain