Gene : Cagra.4003s0037 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10623 - MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER Genomic Order:  37
Name:  ? Cagra.4003s0037 Secondary Identifier:  ? PAC:28894821
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4003s0037 0.5kb upstream 0.5kb upstream 2958 true Scaffold4003: 156073-159030 Capsella grandiflora
Cagra.4003s0037 0.5kb upstream 0.5kb upstream 500 false Scaffold4003: 156073-156572 Capsella grandiflora
Cagra.4003s0037 0.5kb downstream 0.5kb downstream 2958 true Scaffold4003: 156573-159530 Capsella grandiflora
Cagra.4003s0037 0.5kb downstream 0.5kb downstream 500 false Scaffold4003: 159031-159530 Capsella grandiflora
Cagra.4003s0037 1.0kb upstream 1.0kb upstream 3458 true Scaffold4003: 155573-159030 Capsella grandiflora
Cagra.4003s0037 1.0kb upstream 1.0kb upstream 1000 false Scaffold4003: 155573-156572 Capsella grandiflora
Cagra.4003s0037 1.0kb downstream 1.0kb downstream 3458 true Scaffold4003: 156573-160030 Capsella grandiflora
Cagra.4003s0037 1.0kb downstream 1.0kb downstream 1000 false Scaffold4003: 159031-160030 Capsella grandiflora
Cagra.4003s0037 2.0kb upstream 2.0kb upstream 4458 true Scaffold4003: 154573-159030 Capsella grandiflora
Cagra.4003s0037 2.0kb upstream 2.0kb upstream 2000 false Scaffold4003: 154573-156572 Capsella grandiflora
Cagra.4003s0037 2.0kb downstream 2.0kb downstream 4458 true Scaffold4003: 156573-161030 Capsella grandiflora
Cagra.4003s0037 2.0kb downstream 2.0kb downstream 2000 false Scaffold4003: 159031-161030 Capsella grandiflora
Cagra.4003s0037 5.0kb upstream 5.0kb upstream 7458 true Scaffold4003: 151573-159030 Capsella grandiflora
Cagra.4003s0037 5.0kb upstream 5.0kb upstream 5000 false Scaffold4003: 151573-156572 Capsella grandiflora
Cagra.4003s0037 5.0kb downstream 5.0kb downstream 7458 true Scaffold4003: 156573-164030 Capsella grandiflora
Cagra.4003s0037 5.0kb downstream 5.0kb downstream 5000 false Scaffold4003: 159031-164030 Capsella grandiflora
Cagra.4003s0037 10.0kb upstream 10.0kb upstream 12458 true Scaffold4003: 146573-159030 Capsella grandiflora
Cagra.4003s0037 10.0kb upstream 10.0kb upstream 10000 false Scaffold4003: 146573-156572 Capsella grandiflora
Cagra.4003s0037 10.0kb downstream 10.0kb downstream 12458 true Scaffold4003: 156573-169030 Capsella grandiflora
Cagra.4003s0037 10.0kb downstream 10.0kb downstream 10000 false Scaffold4003: 159031-169030 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369576 5261 Brassicaceae View MSA
123839442 5264 Brassicales-Malvales View MSA
124341285 5266 SBM View MSA
124241403 5268 Malvidae View MSA
124060417 5270 Rosid View MSA
123739440 5271 Pentapetalae View MSA
122791144 5272 Eudicot View MSA
122047521 5273 Angiosperm View MSA
121351691 5274 Embryophyte View MSA
123424537 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain