Gene : Cagra.4003s0050 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11214:SF119 - BETA-1,3-GALACTOSYLTRANSFERASE 18-RELATED Genomic Order:  50
Name:  ? Cagra.4003s0050 Secondary Identifier:  ? PAC:28894826
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4003s0050 0.5kb upstream 0.5kb upstream 3680 true Scaffold4003: 204965-208644 Capsella grandiflora
Cagra.4003s0050 0.5kb upstream 0.5kb upstream 500 false Scaffold4003: 204965-205464 Capsella grandiflora
Cagra.4003s0050 0.5kb downstream 0.5kb downstream 3680 true Scaffold4003: 205465-209144 Capsella grandiflora
Cagra.4003s0050 0.5kb downstream 0.5kb downstream 500 false Scaffold4003: 208645-209144 Capsella grandiflora
Cagra.4003s0050 1.0kb upstream 1.0kb upstream 4180 true Scaffold4003: 204465-208644 Capsella grandiflora
Cagra.4003s0050 1.0kb upstream 1.0kb upstream 1000 false Scaffold4003: 204465-205464 Capsella grandiflora
Cagra.4003s0050 1.0kb downstream 1.0kb downstream 4180 true Scaffold4003: 205465-209644 Capsella grandiflora
Cagra.4003s0050 1.0kb downstream 1.0kb downstream 1000 false Scaffold4003: 208645-209644 Capsella grandiflora
Cagra.4003s0050 2.0kb upstream 2.0kb upstream 5180 true Scaffold4003: 203465-208644 Capsella grandiflora
Cagra.4003s0050 2.0kb upstream 2.0kb upstream 2000 false Scaffold4003: 203465-205464 Capsella grandiflora
Cagra.4003s0050 2.0kb downstream 2.0kb downstream 5180 true Scaffold4003: 205465-210644 Capsella grandiflora
Cagra.4003s0050 2.0kb downstream 2.0kb downstream 2000 false Scaffold4003: 208645-210644 Capsella grandiflora
Cagra.4003s0050 5.0kb upstream 5.0kb upstream 8180 true Scaffold4003: 200465-208644 Capsella grandiflora
Cagra.4003s0050 5.0kb upstream 5.0kb upstream 5000 false Scaffold4003: 200465-205464 Capsella grandiflora
Cagra.4003s0050 5.0kb downstream 5.0kb downstream 8180 true Scaffold4003: 205465-213644 Capsella grandiflora
Cagra.4003s0050 5.0kb downstream 5.0kb downstream 5000 false Scaffold4003: 208645-213644 Capsella grandiflora
Cagra.4003s0050 10.0kb upstream 10.0kb upstream 13180 true Scaffold4003: 195465-208644 Capsella grandiflora
Cagra.4003s0050 10.0kb upstream 10.0kb upstream 10000 false Scaffold4003: 195465-205464 Capsella grandiflora
Cagra.4003s0050 10.0kb downstream 10.0kb downstream 9627 true Scaffold4003: 205465-215091 Capsella grandiflora
Cagra.4003s0050 10.0kb downstream 10.0kb downstream 6447 false Scaffold4003: 208645-215091 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371753 5261 Brassicaceae View MSA
123827370 5264 Brassicales-Malvales View MSA
124348344 5266 SBM View MSA
124247839 5268 Malvidae View MSA
124070105 5270 Rosid View MSA
123744575 5271 Pentapetalae View MSA
122795543 5272 Eudicot View MSA
122042506 5273 Angiosperm View MSA
121350326 5274 Embryophyte View MSA
123381679 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain