Gene : Cagra.4006s0009 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10996:SF108 - D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE-LIKE PROTEIN Genomic Order:  9
Name:  ? Cagra.4006s0009 Secondary Identifier:  ? PAC:28913405
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4006s0009 0.5kb upstream 0.5kb upstream 2816 true Scaffold4006: 34194-37009 Capsella grandiflora
Cagra.4006s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold4006: 34194-34693 Capsella grandiflora
Cagra.4006s0009 0.5kb downstream 0.5kb downstream 2816 true Scaffold4006: 34694-37509 Capsella grandiflora
Cagra.4006s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold4006: 37010-37509 Capsella grandiflora
Cagra.4006s0009 1.0kb upstream 1.0kb upstream 3316 true Scaffold4006: 33694-37009 Capsella grandiflora
Cagra.4006s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold4006: 33694-34693 Capsella grandiflora
Cagra.4006s0009 1.0kb downstream 1.0kb downstream 3316 true Scaffold4006: 34694-38009 Capsella grandiflora
Cagra.4006s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold4006: 37010-38009 Capsella grandiflora
Cagra.4006s0009 2.0kb upstream 2.0kb upstream 4316 true Scaffold4006: 32694-37009 Capsella grandiflora
Cagra.4006s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold4006: 32694-34693 Capsella grandiflora
Cagra.4006s0009 2.0kb downstream 2.0kb downstream 4316 true Scaffold4006: 34694-39009 Capsella grandiflora
Cagra.4006s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold4006: 37010-39009 Capsella grandiflora
Cagra.4006s0009 5.0kb upstream 5.0kb upstream 7316 true Scaffold4006: 29694-37009 Capsella grandiflora
Cagra.4006s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold4006: 29694-34693 Capsella grandiflora
Cagra.4006s0009 5.0kb downstream 5.0kb downstream 7316 true Scaffold4006: 34694-42009 Capsella grandiflora
Cagra.4006s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold4006: 37010-42009 Capsella grandiflora
Cagra.4006s0009 10.0kb upstream 10.0kb upstream 12316 true Scaffold4006: 24694-37009 Capsella grandiflora
Cagra.4006s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold4006: 24694-34693 Capsella grandiflora
Cagra.4006s0009 10.0kb downstream 10.0kb downstream 12316 true Scaffold4006: 34694-47009 Capsella grandiflora
Cagra.4006s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold4006: 37010-47009 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360890 5261 Brassicaceae View MSA
123831607 5264 Brassicales-Malvales View MSA
124340325 5266 SBM View MSA
124237310 5268 Malvidae View MSA
124063088 5270 Rosid View MSA
123747580 5271 Pentapetalae View MSA
122795035 5272 Eudicot View MSA
122051675 5273 Angiosperm View MSA
121344696 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain