Gene : Cagra.4006s0022 C. grandiflora v1.1
Defline:  (1 of 1) PF02428 - Potato type II proteinase inhibitor family (Prot_inhib_II) Genomic Order:  22
Name:  ? Cagra.4006s0022 Secondary Identifier:  ? PAC:28913391
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4006s0022 0.5kb upstream 0.5kb upstream 923 true Scaffold4006: 97767-98689 Capsella grandiflora
Cagra.4006s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold4006: 98190-98689 Capsella grandiflora
Cagra.4006s0022 0.5kb downstream 0.5kb downstream 923 true Scaffold4006: 97267-98189 Capsella grandiflora
Cagra.4006s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold4006: 97267-97766 Capsella grandiflora
Cagra.4006s0022 1.0kb upstream 1.0kb upstream 1423 true Scaffold4006: 97767-99189 Capsella grandiflora
Cagra.4006s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold4006: 98190-99189 Capsella grandiflora
Cagra.4006s0022 1.0kb downstream 1.0kb downstream 1423 true Scaffold4006: 96767-98189 Capsella grandiflora
Cagra.4006s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold4006: 96767-97766 Capsella grandiflora
Cagra.4006s0022 2.0kb upstream 2.0kb upstream 2423 true Scaffold4006: 97767-100189 Capsella grandiflora
Cagra.4006s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold4006: 98190-100189 Capsella grandiflora
Cagra.4006s0022 2.0kb downstream 2.0kb downstream 2423 true Scaffold4006: 95767-98189 Capsella grandiflora
Cagra.4006s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold4006: 95767-97766 Capsella grandiflora
Cagra.4006s0022 5.0kb upstream 5.0kb upstream 5423 true Scaffold4006: 97767-103189 Capsella grandiflora
Cagra.4006s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold4006: 98190-103189 Capsella grandiflora
Cagra.4006s0022 5.0kb downstream 5.0kb downstream 5423 true Scaffold4006: 92767-98189 Capsella grandiflora
Cagra.4006s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold4006: 92767-97766 Capsella grandiflora
Cagra.4006s0022 10.0kb upstream 10.0kb upstream 10423 true Scaffold4006: 97767-108189 Capsella grandiflora
Cagra.4006s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold4006: 98190-108189 Capsella grandiflora
Cagra.4006s0022 10.0kb downstream 10.0kb downstream 10423 true Scaffold4006: 87767-98189 Capsella grandiflora
Cagra.4006s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold4006: 87767-97766 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029766 5273 Angiosperm View MSA
122378602 5261 Brassicaceae View MSA
123801929 5264 Brassicales-Malvales View MSA
124299176 5266 SBM View MSA
124247809 5268 Malvidae View MSA
124069322 5270 Rosid View MSA
123741953 5271 Pentapetalae View MSA
122770167 5272 Eudicot View MSA
121299052 5274 Embryophyte View MSA
123336975 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain