Gene : Cagra.4006s0019 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23241:SF50 - LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  19
Name:  ? Cagra.4006s0019 Secondary Identifier:  ? PAC:28913377
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4006s0019 0.5kb upstream 0.5kb upstream 2362 true Scaffold4006: 88885-91246 Capsella grandiflora
Cagra.4006s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold4006: 90747-91246 Capsella grandiflora
Cagra.4006s0019 0.5kb downstream 0.5kb downstream 2362 true Scaffold4006: 88385-90746 Capsella grandiflora
Cagra.4006s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold4006: 88385-88884 Capsella grandiflora
Cagra.4006s0019 1.0kb upstream 1.0kb upstream 2862 true Scaffold4006: 88885-91746 Capsella grandiflora
Cagra.4006s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold4006: 90747-91746 Capsella grandiflora
Cagra.4006s0019 1.0kb downstream 1.0kb downstream 2862 true Scaffold4006: 87885-90746 Capsella grandiflora
Cagra.4006s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold4006: 87885-88884 Capsella grandiflora
Cagra.4006s0019 2.0kb upstream 2.0kb upstream 3862 true Scaffold4006: 88885-92746 Capsella grandiflora
Cagra.4006s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold4006: 90747-92746 Capsella grandiflora
Cagra.4006s0019 2.0kb downstream 2.0kb downstream 3862 true Scaffold4006: 86885-90746 Capsella grandiflora
Cagra.4006s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold4006: 86885-88884 Capsella grandiflora
Cagra.4006s0019 5.0kb upstream 5.0kb upstream 6862 true Scaffold4006: 88885-95746 Capsella grandiflora
Cagra.4006s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold4006: 90747-95746 Capsella grandiflora
Cagra.4006s0019 5.0kb downstream 5.0kb downstream 6862 true Scaffold4006: 83885-90746 Capsella grandiflora
Cagra.4006s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold4006: 83885-88884 Capsella grandiflora
Cagra.4006s0019 10.0kb upstream 10.0kb upstream 11862 true Scaffold4006: 88885-100746 Capsella grandiflora
Cagra.4006s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold4006: 90747-100746 Capsella grandiflora
Cagra.4006s0019 10.0kb downstream 10.0kb downstream 11862 true Scaffold4006: 78885-90746 Capsella grandiflora
Cagra.4006s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold4006: 78885-88884 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371678 5261 Brassicaceae View MSA
123835798 5264 Brassicales-Malvales View MSA
124336418 5266 SBM View MSA
124238341 5268 Malvidae View MSA
124072864 5270 Rosid View MSA
123741808 5271 Pentapetalae View MSA
122794616 5272 Eudicot View MSA
122045721 5273 Angiosperm View MSA
121349691 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain