Gene : Cagra.4006s0033 C. grandiflora v1.1
Defline:  (1 of 5) KOG3140 - Predicted membrane protein Genomic Order:  33
Name:  ? Cagra.4006s0033 Secondary Identifier:  ? PAC:28913383
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4006s0033 0.5kb upstream 0.5kb upstream 2225 true Scaffold4006: 137741-139965 Capsella grandiflora
Cagra.4006s0033 0.5kb upstream 0.5kb upstream 500 false Scaffold4006: 139466-139965 Capsella grandiflora
Cagra.4006s0033 0.5kb downstream 0.5kb downstream 2225 true Scaffold4006: 137241-139465 Capsella grandiflora
Cagra.4006s0033 0.5kb downstream 0.5kb downstream 500 false Scaffold4006: 137241-137740 Capsella grandiflora
Cagra.4006s0033 1.0kb upstream 1.0kb upstream 2725 true Scaffold4006: 137741-140465 Capsella grandiflora
Cagra.4006s0033 1.0kb upstream 1.0kb upstream 1000 false Scaffold4006: 139466-140465 Capsella grandiflora
Cagra.4006s0033 1.0kb downstream 1.0kb downstream 2725 true Scaffold4006: 136741-139465 Capsella grandiflora
Cagra.4006s0033 1.0kb downstream 1.0kb downstream 1000 false Scaffold4006: 136741-137740 Capsella grandiflora
Cagra.4006s0033 2.0kb upstream 2.0kb upstream 3725 true Scaffold4006: 137741-141465 Capsella grandiflora
Cagra.4006s0033 2.0kb upstream 2.0kb upstream 2000 false Scaffold4006: 139466-141465 Capsella grandiflora
Cagra.4006s0033 2.0kb downstream 2.0kb downstream 3725 true Scaffold4006: 135741-139465 Capsella grandiflora
Cagra.4006s0033 2.0kb downstream 2.0kb downstream 2000 false Scaffold4006: 135741-137740 Capsella grandiflora
Cagra.4006s0033 5.0kb upstream 5.0kb upstream 6725 true Scaffold4006: 137741-144465 Capsella grandiflora
Cagra.4006s0033 5.0kb upstream 5.0kb upstream 5000 false Scaffold4006: 139466-144465 Capsella grandiflora
Cagra.4006s0033 5.0kb downstream 5.0kb downstream 6725 true Scaffold4006: 132741-139465 Capsella grandiflora
Cagra.4006s0033 5.0kb downstream 5.0kb downstream 5000 false Scaffold4006: 132741-137740 Capsella grandiflora
Cagra.4006s0033 10.0kb upstream 10.0kb upstream 11725 true Scaffold4006: 137741-149465 Capsella grandiflora
Cagra.4006s0033 10.0kb upstream 10.0kb upstream 10000 false Scaffold4006: 139466-149465 Capsella grandiflora
Cagra.4006s0033 10.0kb downstream 10.0kb downstream 11725 true Scaffold4006: 127741-139465 Capsella grandiflora
Cagra.4006s0033 10.0kb downstream 10.0kb downstream 10000 false Scaffold4006: 127741-137740 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367398 5261 Brassicaceae View MSA
123837673 5264 Brassicales-Malvales View MSA
124343587 5266 SBM View MSA
124250786 5268 Malvidae View MSA
124063946 5270 Rosid View MSA
123748602 5271 Pentapetalae View MSA
122793245 5272 Eudicot View MSA
122048456 5273 Angiosperm View MSA
121348714 5274 Embryophyte View MSA
123428145 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain