Gene : Cagra.4011s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR33370:SF1 - TRANSLATION INITIATION FACTOR IF-1, CHLOROPLASTIC Genomic Order:  5
Name:  ? Cagra.4011s0005 Secondary Identifier:  ? PAC:28897559
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4011s0005 0.5kb upstream 0.5kb upstream 1446 true Scaffold4011: 19964-21409 Capsella grandiflora
Cagra.4011s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold4011: 19964-20463 Capsella grandiflora
Cagra.4011s0005 0.5kb downstream 0.5kb downstream 1446 true Scaffold4011: 20464-21909 Capsella grandiflora
Cagra.4011s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold4011: 21410-21909 Capsella grandiflora
Cagra.4011s0005 1.0kb upstream 1.0kb upstream 1946 true Scaffold4011: 19464-21409 Capsella grandiflora
Cagra.4011s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold4011: 19464-20463 Capsella grandiflora
Cagra.4011s0005 1.0kb downstream 1.0kb downstream 1946 true Scaffold4011: 20464-22409 Capsella grandiflora
Cagra.4011s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold4011: 21410-22409 Capsella grandiflora
Cagra.4011s0005 2.0kb upstream 2.0kb upstream 2946 true Scaffold4011: 18464-21409 Capsella grandiflora
Cagra.4011s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold4011: 18464-20463 Capsella grandiflora
Cagra.4011s0005 2.0kb downstream 2.0kb downstream 2946 true Scaffold4011: 20464-23409 Capsella grandiflora
Cagra.4011s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold4011: 21410-23409 Capsella grandiflora
Cagra.4011s0005 5.0kb upstream 5.0kb upstream 5946 true Scaffold4011: 15464-21409 Capsella grandiflora
Cagra.4011s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold4011: 15464-20463 Capsella grandiflora
Cagra.4011s0005 5.0kb downstream 5.0kb downstream 5946 true Scaffold4011: 20464-26409 Capsella grandiflora
Cagra.4011s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold4011: 21410-26409 Capsella grandiflora
Cagra.4011s0005 10.0kb upstream 10.0kb upstream 10946 true Scaffold4011: 10464-21409 Capsella grandiflora
Cagra.4011s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold4011: 10464-20463 Capsella grandiflora
Cagra.4011s0005 10.0kb downstream 10.0kb downstream 10946 true Scaffold4011: 20464-31409 Capsella grandiflora
Cagra.4011s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold4011: 21410-31409 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028984 5273 Angiosperm View MSA
122370860 5261 Brassicaceae View MSA
123833531 5264 Brassicales-Malvales View MSA
124340122 5266 SBM View MSA
124243988 5268 Malvidae View MSA
124050669 5270 Rosid View MSA
123744849 5271 Pentapetalae View MSA
122771270 5272 Eudicot View MSA
121351623 5274 Embryophyte View MSA
123428074 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain