Gene : Cagra.4006s0038 C. grandiflora v1.1
Defline:  (1 of 6) PTHR19432:SF38 - SUCROSE TRANSPORT PROTEIN SUC1-RELATED Genomic Order:  38
Name:  ? Cagra.4006s0038 Secondary Identifier:  ? PAC:28913384
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4006s0038 0.5kb upstream 0.5kb upstream 2611 true Scaffold4006: 158737-161347 Capsella grandiflora
Cagra.4006s0038 0.5kb upstream 0.5kb upstream 500 false Scaffold4006: 160848-161347 Capsella grandiflora
Cagra.4006s0038 0.5kb downstream 0.5kb downstream 2611 true Scaffold4006: 158237-160847 Capsella grandiflora
Cagra.4006s0038 0.5kb downstream 0.5kb downstream 500 false Scaffold4006: 158237-158736 Capsella grandiflora
Cagra.4006s0038 1.0kb upstream 1.0kb upstream 3111 true Scaffold4006: 158737-161847 Capsella grandiflora
Cagra.4006s0038 1.0kb upstream 1.0kb upstream 1000 false Scaffold4006: 160848-161847 Capsella grandiflora
Cagra.4006s0038 1.0kb downstream 1.0kb downstream 3111 true Scaffold4006: 157737-160847 Capsella grandiflora
Cagra.4006s0038 1.0kb downstream 1.0kb downstream 1000 false Scaffold4006: 157737-158736 Capsella grandiflora
Cagra.4006s0038 2.0kb upstream 2.0kb upstream 4111 true Scaffold4006: 158737-162847 Capsella grandiflora
Cagra.4006s0038 2.0kb upstream 2.0kb upstream 2000 false Scaffold4006: 160848-162847 Capsella grandiflora
Cagra.4006s0038 2.0kb downstream 2.0kb downstream 4111 true Scaffold4006: 156737-160847 Capsella grandiflora
Cagra.4006s0038 2.0kb downstream 2.0kb downstream 2000 false Scaffold4006: 156737-158736 Capsella grandiflora
Cagra.4006s0038 5.0kb upstream 5.0kb upstream 7111 true Scaffold4006: 158737-165847 Capsella grandiflora
Cagra.4006s0038 5.0kb upstream 5.0kb upstream 5000 false Scaffold4006: 160848-165847 Capsella grandiflora
Cagra.4006s0038 5.0kb downstream 5.0kb downstream 7111 true Scaffold4006: 153737-160847 Capsella grandiflora
Cagra.4006s0038 5.0kb downstream 5.0kb downstream 5000 false Scaffold4006: 153737-158736 Capsella grandiflora
Cagra.4006s0038 10.0kb upstream 10.0kb upstream 7724 true Scaffold4006: 158737-166460 Capsella grandiflora
Cagra.4006s0038 10.0kb upstream 10.0kb upstream 5613 false Scaffold4006: 160848-166460 Capsella grandiflora
Cagra.4006s0038 10.0kb downstream 10.0kb downstream 12111 true Scaffold4006: 148737-160847 Capsella grandiflora
Cagra.4006s0038 10.0kb downstream 10.0kb downstream 10000 false Scaffold4006: 148737-158736 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381780 5261 Brassicaceae View MSA
123842226 5264 Brassicales-Malvales View MSA
124323333 5266 SBM View MSA
124251923 5268 Malvidae View MSA
124066357 5270 Rosid View MSA
123752867 5271 Pentapetalae View MSA
122774831 5272 Eudicot View MSA
122050885 5273 Angiosperm View MSA
121349366 5274 Embryophyte View MSA
123381287 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain