Gene : Cagra.3883s0001 C. grandiflora v1.1
Defline:  (1 of 4) PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Genomic Order:  1
Name:  ? Cagra.3883s0001 Secondary Identifier:  ? PAC:28915336
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3883s0001 0.5kb upstream 0.5kb upstream 1261 true Scaffold3883: 1-1261 Capsella grandiflora
Cagra.3883s0001 0.5kb upstream 0.5kb upstream 465 false Scaffold3883: 1-465 Capsella grandiflora
Cagra.3883s0001 0.5kb downstream 0.5kb downstream 1296 true Scaffold3883: 466-1761 Capsella grandiflora
Cagra.3883s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold3883: 1262-1761 Capsella grandiflora
Cagra.3883s0001 1.0kb upstream 1.0kb upstream 1261 true Scaffold3883: 1-1261 Capsella grandiflora
Cagra.3883s0001 1.0kb upstream 1.0kb upstream 465 false Scaffold3883: 1-465 Capsella grandiflora
Cagra.3883s0001 1.0kb downstream 1.0kb downstream 1438 true Scaffold3883: 466-1903 Capsella grandiflora
Cagra.3883s0001 1.0kb downstream 1.0kb downstream 642 false Scaffold3883: 1262-1903 Capsella grandiflora
Cagra.3883s0001 2.0kb upstream 2.0kb upstream 1261 true Scaffold3883: 1-1261 Capsella grandiflora
Cagra.3883s0001 2.0kb upstream 2.0kb upstream 465 false Scaffold3883: 1-465 Capsella grandiflora
Cagra.3883s0001 2.0kb downstream 2.0kb downstream 1438 true Scaffold3883: 466-1903 Capsella grandiflora
Cagra.3883s0001 2.0kb downstream 2.0kb downstream 642 false Scaffold3883: 1262-1903 Capsella grandiflora
Cagra.3883s0001 5.0kb upstream 5.0kb upstream 1261 true Scaffold3883: 1-1261 Capsella grandiflora
Cagra.3883s0001 5.0kb upstream 5.0kb upstream 465 false Scaffold3883: 1-465 Capsella grandiflora
Cagra.3883s0001 5.0kb downstream 5.0kb downstream 1438 true Scaffold3883: 466-1903 Capsella grandiflora
Cagra.3883s0001 5.0kb downstream 5.0kb downstream 642 false Scaffold3883: 1262-1903 Capsella grandiflora
Cagra.3883s0001 10.0kb upstream 10.0kb upstream 1261 true Scaffold3883: 1-1261 Capsella grandiflora
Cagra.3883s0001 10.0kb upstream 10.0kb upstream 465 false Scaffold3883: 1-465 Capsella grandiflora
Cagra.3883s0001 10.0kb downstream 10.0kb downstream 1438 true Scaffold3883: 466-1903 Capsella grandiflora
Cagra.3883s0001 10.0kb downstream 10.0kb downstream 642 false Scaffold3883: 1262-1903 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360171 5261 Brassicaceae View MSA
123797902 5264 Brassicales-Malvales View MSA
124295601 5266 SBM View MSA
124147993 5268 Malvidae View MSA
124067511 5270 Rosid View MSA
123750360 5271 Pentapetalae View MSA
122793226 5272 Eudicot View MSA
122046070 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain