Gene : Cagra.3862s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR32054:SF5 - PROTEIN PLASTID MOVEMENT IMPAIRED 15-RELATED Genomic Order:  3
Name:  ? Cagra.3862s0003 Secondary Identifier:  ? PAC:28905084
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3862s0003 0.5kb upstream 0.5kb upstream 2550 true Scaffold3862: 11330-13879 Capsella grandiflora
Cagra.3862s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold3862: 11330-11829 Capsella grandiflora
Cagra.3862s0003 0.5kb downstream 0.5kb downstream 2550 true Scaffold3862: 11830-14379 Capsella grandiflora
Cagra.3862s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold3862: 13880-14379 Capsella grandiflora
Cagra.3862s0003 1.0kb upstream 1.0kb upstream 3050 true Scaffold3862: 10830-13879 Capsella grandiflora
Cagra.3862s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold3862: 10830-11829 Capsella grandiflora
Cagra.3862s0003 1.0kb downstream 1.0kb downstream 2830 true Scaffold3862: 11830-14659 Capsella grandiflora
Cagra.3862s0003 1.0kb downstream 1.0kb downstream 780 false Scaffold3862: 13880-14659 Capsella grandiflora
Cagra.3862s0003 2.0kb upstream 2.0kb upstream 4050 true Scaffold3862: 9830-13879 Capsella grandiflora
Cagra.3862s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold3862: 9830-11829 Capsella grandiflora
Cagra.3862s0003 2.0kb downstream 2.0kb downstream 2830 true Scaffold3862: 11830-14659 Capsella grandiflora
Cagra.3862s0003 2.0kb downstream 2.0kb downstream 780 false Scaffold3862: 13880-14659 Capsella grandiflora
Cagra.3862s0003 5.0kb upstream 5.0kb upstream 7050 true Scaffold3862: 6830-13879 Capsella grandiflora
Cagra.3862s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold3862: 6830-11829 Capsella grandiflora
Cagra.3862s0003 5.0kb downstream 5.0kb downstream 2830 true Scaffold3862: 11830-14659 Capsella grandiflora
Cagra.3862s0003 5.0kb downstream 5.0kb downstream 780 false Scaffold3862: 13880-14659 Capsella grandiflora
Cagra.3862s0003 10.0kb upstream 10.0kb upstream 12050 true Scaffold3862: 1830-13879 Capsella grandiflora
Cagra.3862s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold3862: 1830-11829 Capsella grandiflora
Cagra.3862s0003 10.0kb downstream 10.0kb downstream 2830 true Scaffold3862: 11830-14659 Capsella grandiflora
Cagra.3862s0003 10.0kb downstream 10.0kb downstream 780 false Scaffold3862: 13880-14659 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366666 5261 Brassicaceae View MSA
123799222 5264 Brassicales-Malvales View MSA
124296768 5266 SBM View MSA
124148828 5268 Malvidae View MSA
124068049 5270 Rosid View MSA
123748469 5271 Pentapetalae View MSA
122790777 5272 Eudicot View MSA
122041611 5273 Angiosperm View MSA
121351750 5274 Embryophyte View MSA
123382308 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain