Gene : Cagra.3924s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22814:SF5 - F10A16.22 PROTEIN Genomic Order:  3
Name:  ? Cagra.3924s0003 Secondary Identifier:  ? PAC:28900160
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3924s0003 0.5kb upstream 0.5kb upstream 1013 true Scaffold3924: 14711-15723 Capsella grandiflora
Cagra.3924s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold3924: 15224-15723 Capsella grandiflora
Cagra.3924s0003 0.5kb downstream 0.5kb downstream 1013 true Scaffold3924: 14211-15223 Capsella grandiflora
Cagra.3924s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold3924: 14211-14710 Capsella grandiflora
Cagra.3924s0003 1.0kb upstream 1.0kb upstream 1513 true Scaffold3924: 14711-16223 Capsella grandiflora
Cagra.3924s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold3924: 15224-16223 Capsella grandiflora
Cagra.3924s0003 1.0kb downstream 1.0kb downstream 1513 true Scaffold3924: 13711-15223 Capsella grandiflora
Cagra.3924s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold3924: 13711-14710 Capsella grandiflora
Cagra.3924s0003 2.0kb upstream 2.0kb upstream 2513 true Scaffold3924: 14711-17223 Capsella grandiflora
Cagra.3924s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold3924: 15224-17223 Capsella grandiflora
Cagra.3924s0003 2.0kb downstream 2.0kb downstream 2513 true Scaffold3924: 12711-15223 Capsella grandiflora
Cagra.3924s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold3924: 12711-14710 Capsella grandiflora
Cagra.3924s0003 5.0kb upstream 5.0kb upstream 5513 true Scaffold3924: 14711-20223 Capsella grandiflora
Cagra.3924s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold3924: 15224-20223 Capsella grandiflora
Cagra.3924s0003 5.0kb downstream 5.0kb downstream 5513 true Scaffold3924: 9711-15223 Capsella grandiflora
Cagra.3924s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold3924: 9711-14710 Capsella grandiflora
Cagra.3924s0003 10.0kb upstream 10.0kb upstream 10513 true Scaffold3924: 14711-25223 Capsella grandiflora
Cagra.3924s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold3924: 15224-25223 Capsella grandiflora
Cagra.3924s0003 10.0kb downstream 10.0kb downstream 10513 true Scaffold3924: 4711-15223 Capsella grandiflora
Cagra.3924s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold3924: 4711-14710 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363392 5261 Brassicaceae View MSA
123798533 5264 Brassicales-Malvales View MSA
124350273 5266 SBM View MSA
124253793 5268 Malvidae View MSA
124070077 5270 Rosid View MSA
123749525 5271 Pentapetalae View MSA
122797492 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain