Gene : Cagra.3930s0008 C. grandiflora v1.1
Defline:  (1 of 2) PTHR33601:SF7 - PROTEIN LITTLE ZIPPER 3 Genomic Order:  8
Name:  ? Cagra.3930s0008 Secondary Identifier:  ? PAC:28893493
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3930s0008 0.5kb upstream 0.5kb upstream 1902 true Scaffold3930: 18913-20814 Capsella grandiflora
Cagra.3930s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold3930: 20315-20814 Capsella grandiflora
Cagra.3930s0008 0.5kb downstream 0.5kb downstream 1902 true Scaffold3930: 18413-20314 Capsella grandiflora
Cagra.3930s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold3930: 18413-18912 Capsella grandiflora
Cagra.3930s0008 1.0kb upstream 1.0kb upstream 2402 true Scaffold3930: 18913-21314 Capsella grandiflora
Cagra.3930s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold3930: 20315-21314 Capsella grandiflora
Cagra.3930s0008 1.0kb downstream 1.0kb downstream 2402 true Scaffold3930: 17913-20314 Capsella grandiflora
Cagra.3930s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold3930: 17913-18912 Capsella grandiflora
Cagra.3930s0008 2.0kb upstream 2.0kb upstream 3402 true Scaffold3930: 18913-22314 Capsella grandiflora
Cagra.3930s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold3930: 20315-22314 Capsella grandiflora
Cagra.3930s0008 2.0kb downstream 2.0kb downstream 3402 true Scaffold3930: 16913-20314 Capsella grandiflora
Cagra.3930s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold3930: 16913-18912 Capsella grandiflora
Cagra.3930s0008 5.0kb upstream 5.0kb upstream 6402 true Scaffold3930: 18913-25314 Capsella grandiflora
Cagra.3930s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold3930: 20315-25314 Capsella grandiflora
Cagra.3930s0008 5.0kb downstream 5.0kb downstream 6402 true Scaffold3930: 13913-20314 Capsella grandiflora
Cagra.3930s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold3930: 13913-18912 Capsella grandiflora
Cagra.3930s0008 10.0kb upstream 10.0kb upstream 8925 true Scaffold3930: 18913-27837 Capsella grandiflora
Cagra.3930s0008 10.0kb upstream 10.0kb upstream 7523 false Scaffold3930: 20315-27837 Capsella grandiflora
Cagra.3930s0008 10.0kb downstream 10.0kb downstream 11402 true Scaffold3930: 8913-20314 Capsella grandiflora
Cagra.3930s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold3930: 8913-18912 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377892 5261 Brassicaceae View MSA
123837499 5264 Brassicales-Malvales View MSA
124350083 5266 SBM View MSA
124246935 5268 Malvidae View MSA
124071909 5270 Rosid View MSA
123751498 5271 Pentapetalae View MSA
122790850 5272 Eudicot View MSA
122046003 5273 Angiosperm View MSA
121310535 5274 Embryophyte View MSA
123347994 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain