Gene : Cagra.3954s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10799:SF779 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A MEMBER 3-LIKE 3-RELATED Genomic Order:  5
Name:  ? Cagra.3954s0005 Secondary Identifier:  ? PAC:28903031
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3954s0005 0.5kb upstream 0.5kb upstream 6500 true Scaffold3954: 22030-28529 Capsella grandiflora
Cagra.3954s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold3954: 28030-28529 Capsella grandiflora
Cagra.3954s0005 0.5kb downstream 0.5kb downstream 6500 true Scaffold3954: 21530-28029 Capsella grandiflora
Cagra.3954s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold3954: 21530-22029 Capsella grandiflora
Cagra.3954s0005 1.0kb upstream 1.0kb upstream 7000 true Scaffold3954: 22030-29029 Capsella grandiflora
Cagra.3954s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold3954: 28030-29029 Capsella grandiflora
Cagra.3954s0005 1.0kb downstream 1.0kb downstream 7000 true Scaffold3954: 21030-28029 Capsella grandiflora
Cagra.3954s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold3954: 21030-22029 Capsella grandiflora
Cagra.3954s0005 2.0kb upstream 2.0kb upstream 8000 true Scaffold3954: 22030-30029 Capsella grandiflora
Cagra.3954s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold3954: 28030-30029 Capsella grandiflora
Cagra.3954s0005 2.0kb downstream 2.0kb downstream 8000 true Scaffold3954: 20030-28029 Capsella grandiflora
Cagra.3954s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold3954: 20030-22029 Capsella grandiflora
Cagra.3954s0005 5.0kb upstream 5.0kb upstream 11000 true Scaffold3954: 22030-33029 Capsella grandiflora
Cagra.3954s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold3954: 28030-33029 Capsella grandiflora
Cagra.3954s0005 5.0kb downstream 5.0kb downstream 11000 true Scaffold3954: 17030-28029 Capsella grandiflora
Cagra.3954s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold3954: 17030-22029 Capsella grandiflora
Cagra.3954s0005 10.0kb upstream 10.0kb upstream 16000 true Scaffold3954: 22030-38029 Capsella grandiflora
Cagra.3954s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold3954: 28030-38029 Capsella grandiflora
Cagra.3954s0005 10.0kb downstream 10.0kb downstream 16000 true Scaffold3954: 12030-28029 Capsella grandiflora
Cagra.3954s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold3954: 12030-22029 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364938 5261 Brassicaceae View MSA
123827889 5264 Brassicales-Malvales View MSA
124337098 5266 SBM View MSA
124236860 5268 Malvidae View MSA
124063428 5270 Rosid View MSA
123739188 5271 Pentapetalae View MSA
122788458 5272 Eudicot View MSA
122044838 5273 Angiosperm View MSA
121345096 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain