Gene : Cagra.3954s0008 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22780:SF4 - AP-2 COMPLEX SUBUNIT ALPHA Genomic Order:  8
Name:  ? Cagra.3954s0008 Secondary Identifier:  ? PAC:28903057
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3954s0008 0.5kb upstream 0.5kb upstream 17673 true Scaffold3954: 35880-53552 Capsella grandiflora
Cagra.3954s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold3954: 53053-53552 Capsella grandiflora
Cagra.3954s0008 0.5kb downstream 0.5kb downstream 17673 true Scaffold3954: 35380-53052 Capsella grandiflora
Cagra.3954s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold3954: 35380-35879 Capsella grandiflora
Cagra.3954s0008 1.0kb upstream 1.0kb upstream 18173 true Scaffold3954: 35880-54052 Capsella grandiflora
Cagra.3954s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold3954: 53053-54052 Capsella grandiflora
Cagra.3954s0008 1.0kb downstream 1.0kb downstream 18173 true Scaffold3954: 34880-53052 Capsella grandiflora
Cagra.3954s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold3954: 34880-35879 Capsella grandiflora
Cagra.3954s0008 2.0kb upstream 2.0kb upstream 19173 true Scaffold3954: 35880-55052 Capsella grandiflora
Cagra.3954s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold3954: 53053-55052 Capsella grandiflora
Cagra.3954s0008 2.0kb downstream 2.0kb downstream 19173 true Scaffold3954: 33880-53052 Capsella grandiflora
Cagra.3954s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold3954: 33880-35879 Capsella grandiflora
Cagra.3954s0008 5.0kb upstream 5.0kb upstream 22173 true Scaffold3954: 35880-58052 Capsella grandiflora
Cagra.3954s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold3954: 53053-58052 Capsella grandiflora
Cagra.3954s0008 5.0kb downstream 5.0kb downstream 22173 true Scaffold3954: 30880-53052 Capsella grandiflora
Cagra.3954s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold3954: 30880-35879 Capsella grandiflora
Cagra.3954s0008 10.0kb upstream 10.0kb upstream 27173 true Scaffold3954: 35880-63052 Capsella grandiflora
Cagra.3954s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold3954: 53053-63052 Capsella grandiflora
Cagra.3954s0008 10.0kb downstream 10.0kb downstream 27173 true Scaffold3954: 25880-53052 Capsella grandiflora
Cagra.3954s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold3954: 25880-35879 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381390 5261 Brassicaceae View MSA
123840576 5264 Brassicales-Malvales View MSA
124345352 5266 SBM View MSA
124240489 5268 Malvidae View MSA
124063183 5270 Rosid View MSA
123736751 5271 Pentapetalae View MSA
122792631 5272 Eudicot View MSA
122046006 5273 Angiosperm View MSA
121350469 5274 Embryophyte View MSA
123424291 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain