Gene : Cagra.3954s0016 C. grandiflora v1.1
Defline:  (1 of 3) PTHR24055:SF228 - PROTEIN KINASE FAMILY PROTEIN-RELATED Genomic Order:  16
Name:  ? Cagra.3954s0016 Secondary Identifier:  ? PAC:28903030
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3954s0016 0.5kb upstream 0.5kb upstream 3038 true Scaffold3954: 77037-80074 Capsella grandiflora
Cagra.3954s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold3954: 79575-80074 Capsella grandiflora
Cagra.3954s0016 0.5kb downstream 0.5kb downstream 3038 true Scaffold3954: 76537-79574 Capsella grandiflora
Cagra.3954s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold3954: 76537-77036 Capsella grandiflora
Cagra.3954s0016 1.0kb upstream 1.0kb upstream 3538 true Scaffold3954: 77037-80574 Capsella grandiflora
Cagra.3954s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold3954: 79575-80574 Capsella grandiflora
Cagra.3954s0016 1.0kb downstream 1.0kb downstream 3538 true Scaffold3954: 76037-79574 Capsella grandiflora
Cagra.3954s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold3954: 76037-77036 Capsella grandiflora
Cagra.3954s0016 2.0kb upstream 2.0kb upstream 4538 true Scaffold3954: 77037-81574 Capsella grandiflora
Cagra.3954s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold3954: 79575-81574 Capsella grandiflora
Cagra.3954s0016 2.0kb downstream 2.0kb downstream 4538 true Scaffold3954: 75037-79574 Capsella grandiflora
Cagra.3954s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold3954: 75037-77036 Capsella grandiflora
Cagra.3954s0016 5.0kb upstream 5.0kb upstream 7538 true Scaffold3954: 77037-84574 Capsella grandiflora
Cagra.3954s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold3954: 79575-84574 Capsella grandiflora
Cagra.3954s0016 5.0kb downstream 5.0kb downstream 7538 true Scaffold3954: 72037-79574 Capsella grandiflora
Cagra.3954s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold3954: 72037-77036 Capsella grandiflora
Cagra.3954s0016 10.0kb upstream 10.0kb upstream 12538 true Scaffold3954: 77037-89574 Capsella grandiflora
Cagra.3954s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold3954: 79575-89574 Capsella grandiflora
Cagra.3954s0016 10.0kb downstream 10.0kb downstream 12538 true Scaffold3954: 67037-79574 Capsella grandiflora
Cagra.3954s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold3954: 67037-77036 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041176 5273 Angiosperm View MSA
122362446 5261 Brassicaceae View MSA
123840628 5264 Brassicales-Malvales View MSA
124347590 5266 SBM View MSA
124251381 5268 Malvidae View MSA
124065365 5270 Rosid View MSA
123743615 5271 Pentapetalae View MSA
122788295 5272 Eudicot View MSA
121347434 5274 Embryophyte View MSA
123426533 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain