Gene : Cagra.3954s0029 C. grandiflora v1.1
Defline:  (1 of 6) PF07795 - Protein of unknown function (DUF1635) (DUF1635) Genomic Order:  29
Name:  ? Cagra.3954s0029 Secondary Identifier:  ? PAC:28903037
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3954s0029 0.5kb upstream 0.5kb upstream 1951 true Scaffold3954: 126010-127960 Capsella grandiflora
Cagra.3954s0029 0.5kb upstream 0.5kb upstream 500 false Scaffold3954: 127461-127960 Capsella grandiflora
Cagra.3954s0029 0.5kb downstream 0.5kb downstream 1951 true Scaffold3954: 125510-127460 Capsella grandiflora
Cagra.3954s0029 0.5kb downstream 0.5kb downstream 500 false Scaffold3954: 125510-126009 Capsella grandiflora
Cagra.3954s0029 1.0kb upstream 1.0kb upstream 2451 true Scaffold3954: 126010-128460 Capsella grandiflora
Cagra.3954s0029 1.0kb upstream 1.0kb upstream 1000 false Scaffold3954: 127461-128460 Capsella grandiflora
Cagra.3954s0029 1.0kb downstream 1.0kb downstream 2451 true Scaffold3954: 125010-127460 Capsella grandiflora
Cagra.3954s0029 1.0kb downstream 1.0kb downstream 1000 false Scaffold3954: 125010-126009 Capsella grandiflora
Cagra.3954s0029 2.0kb upstream 2.0kb upstream 3451 true Scaffold3954: 126010-129460 Capsella grandiflora
Cagra.3954s0029 2.0kb upstream 2.0kb upstream 2000 false Scaffold3954: 127461-129460 Capsella grandiflora
Cagra.3954s0029 2.0kb downstream 2.0kb downstream 3451 true Scaffold3954: 124010-127460 Capsella grandiflora
Cagra.3954s0029 2.0kb downstream 2.0kb downstream 2000 false Scaffold3954: 124010-126009 Capsella grandiflora
Cagra.3954s0029 5.0kb upstream 5.0kb upstream 6451 true Scaffold3954: 126010-132460 Capsella grandiflora
Cagra.3954s0029 5.0kb upstream 5.0kb upstream 5000 false Scaffold3954: 127461-132460 Capsella grandiflora
Cagra.3954s0029 5.0kb downstream 5.0kb downstream 6451 true Scaffold3954: 121010-127460 Capsella grandiflora
Cagra.3954s0029 5.0kb downstream 5.0kb downstream 5000 false Scaffold3954: 121010-126009 Capsella grandiflora
Cagra.3954s0029 10.0kb upstream 10.0kb upstream 11451 true Scaffold3954: 126010-137460 Capsella grandiflora
Cagra.3954s0029 10.0kb upstream 10.0kb upstream 10000 false Scaffold3954: 127461-137460 Capsella grandiflora
Cagra.3954s0029 10.0kb downstream 10.0kb downstream 11451 true Scaffold3954: 116010-127460 Capsella grandiflora
Cagra.3954s0029 10.0kb downstream 10.0kb downstream 10000 false Scaffold3954: 116010-126009 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365068 5261 Brassicaceae View MSA
123840577 5264 Brassicales-Malvales View MSA
124346047 5266 SBM View MSA
124244308 5268 Malvidae View MSA
124069080 5270 Rosid View MSA
123751096 5271 Pentapetalae View MSA
122788553 5272 Eudicot View MSA
122048451 5273 Angiosperm View MSA
121310976 5274 Embryophyte View MSA
123348340 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain