Gene : Cagra.3957s0006 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31496:SF10 - TRANSCRIPTION FACTOR KAN2-RELATED Genomic Order:  6
Name:  ? Cagra.3957s0006 Secondary Identifier:  ? PAC:28914790
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3957s0006 0.5kb upstream 0.5kb upstream 5176 true Scaffold3957: 24009-29184 Capsella grandiflora
Cagra.3957s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold3957: 28685-29184 Capsella grandiflora
Cagra.3957s0006 0.5kb downstream 0.5kb downstream 5176 true Scaffold3957: 23509-28684 Capsella grandiflora
Cagra.3957s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold3957: 23509-24008 Capsella grandiflora
Cagra.3957s0006 1.0kb upstream 1.0kb upstream 5676 true Scaffold3957: 24009-29684 Capsella grandiflora
Cagra.3957s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold3957: 28685-29684 Capsella grandiflora
Cagra.3957s0006 1.0kb downstream 1.0kb downstream 5676 true Scaffold3957: 23009-28684 Capsella grandiflora
Cagra.3957s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold3957: 23009-24008 Capsella grandiflora
Cagra.3957s0006 2.0kb upstream 2.0kb upstream 6676 true Scaffold3957: 24009-30684 Capsella grandiflora
Cagra.3957s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold3957: 28685-30684 Capsella grandiflora
Cagra.3957s0006 2.0kb downstream 2.0kb downstream 6676 true Scaffold3957: 22009-28684 Capsella grandiflora
Cagra.3957s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold3957: 22009-24008 Capsella grandiflora
Cagra.3957s0006 5.0kb upstream 5.0kb upstream 9676 true Scaffold3957: 24009-33684 Capsella grandiflora
Cagra.3957s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold3957: 28685-33684 Capsella grandiflora
Cagra.3957s0006 5.0kb downstream 5.0kb downstream 9676 true Scaffold3957: 19009-28684 Capsella grandiflora
Cagra.3957s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold3957: 19009-24008 Capsella grandiflora
Cagra.3957s0006 10.0kb upstream 10.0kb upstream 14676 true Scaffold3957: 24009-38684 Capsella grandiflora
Cagra.3957s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold3957: 28685-38684 Capsella grandiflora
Cagra.3957s0006 10.0kb downstream 10.0kb downstream 14676 true Scaffold3957: 14009-28684 Capsella grandiflora
Cagra.3957s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold3957: 14009-24008 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362443 5261 Brassicaceae View MSA
123832390 5264 Brassicales-Malvales View MSA
124351224 5266 SBM View MSA
124247804 5268 Malvidae View MSA
124060556 5270 Rosid View MSA
123746843 5271 Pentapetalae View MSA
122791651 5272 Eudicot View MSA
122051060 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349698 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain