Gene : Cagra.3957s0019 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31803:SF7 - UBIQUINOL OXIDASE 3, MITOCHONDRIAL Genomic Order:  19
Name:  ? Cagra.3957s0019 Secondary Identifier:  ? PAC:28914797
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-4302 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3957s0019 0.5kb upstream 0.5kb upstream 2026 true Scaffold3957: 73425-75450 Capsella grandiflora
Cagra.3957s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold3957: 74951-75450 Capsella grandiflora
Cagra.3957s0019 0.5kb downstream 0.5kb downstream 2026 true Scaffold3957: 72925-74950 Capsella grandiflora
Cagra.3957s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold3957: 72925-73424 Capsella grandiflora
Cagra.3957s0019 1.0kb upstream 1.0kb upstream 2526 true Scaffold3957: 73425-75950 Capsella grandiflora
Cagra.3957s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold3957: 74951-75950 Capsella grandiflora
Cagra.3957s0019 1.0kb downstream 1.0kb downstream 2526 true Scaffold3957: 72425-74950 Capsella grandiflora
Cagra.3957s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold3957: 72425-73424 Capsella grandiflora
Cagra.3957s0019 2.0kb upstream 2.0kb upstream 3526 true Scaffold3957: 73425-76950 Capsella grandiflora
Cagra.3957s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold3957: 74951-76950 Capsella grandiflora
Cagra.3957s0019 2.0kb downstream 2.0kb downstream 3526 true Scaffold3957: 71425-74950 Capsella grandiflora
Cagra.3957s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold3957: 71425-73424 Capsella grandiflora
Cagra.3957s0019 5.0kb upstream 5.0kb upstream 6526 true Scaffold3957: 73425-79950 Capsella grandiflora
Cagra.3957s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold3957: 74951-79950 Capsella grandiflora
Cagra.3957s0019 5.0kb downstream 5.0kb downstream 6526 true Scaffold3957: 68425-74950 Capsella grandiflora
Cagra.3957s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold3957: 68425-73424 Capsella grandiflora
Cagra.3957s0019 10.0kb upstream 10.0kb upstream 11526 true Scaffold3957: 73425-84950 Capsella grandiflora
Cagra.3957s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold3957: 74951-84950 Capsella grandiflora
Cagra.3957s0019 10.0kb downstream 10.0kb downstream 11526 true Scaffold3957: 63425-74950 Capsella grandiflora
Cagra.3957s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold3957: 63425-73424 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367042 5261 Brassicaceae View MSA
123799283 5264 Brassicales-Malvales View MSA
124296819 5266 SBM View MSA
124240126 5268 Malvidae View MSA
124071385 5270 Rosid View MSA
123743047 5271 Pentapetalae View MSA
122794845 5272 Eudicot View MSA
122048992 5273 Angiosperm View MSA
121347153 5274 Embryophyte View MSA
123426662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain