Gene : Cagra.3807s0058 C. grandiflora v1.1
Defline:  (1 of 4) 1.11.1.12 - Phospholipid-hydroperoxide glutathione peroxidase / Peroxidation-inhibiting protein Genomic Order:  58
Name:  ? Cagra.3807s0058 Secondary Identifier:  ? PAC:28899198
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-4081 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3807s0058 0.5kb upstream 0.5kb upstream 2093 true Scaffold3807: 212954-215046 Capsella grandiflora
Cagra.3807s0058 0.5kb upstream 0.5kb upstream 500 false Scaffold3807: 212954-213453 Capsella grandiflora
Cagra.3807s0058 0.5kb downstream 0.5kb downstream 2093 true Scaffold3807: 213454-215546 Capsella grandiflora
Cagra.3807s0058 0.5kb downstream 0.5kb downstream 500 false Scaffold3807: 215047-215546 Capsella grandiflora
Cagra.3807s0058 1.0kb upstream 1.0kb upstream 2593 true Scaffold3807: 212454-215046 Capsella grandiflora
Cagra.3807s0058 1.0kb upstream 1.0kb upstream 1000 false Scaffold3807: 212454-213453 Capsella grandiflora
Cagra.3807s0058 1.0kb downstream 1.0kb downstream 2593 true Scaffold3807: 213454-216046 Capsella grandiflora
Cagra.3807s0058 1.0kb downstream 1.0kb downstream 1000 false Scaffold3807: 215047-216046 Capsella grandiflora
Cagra.3807s0058 2.0kb upstream 2.0kb upstream 3593 true Scaffold3807: 211454-215046 Capsella grandiflora
Cagra.3807s0058 2.0kb upstream 2.0kb upstream 2000 false Scaffold3807: 211454-213453 Capsella grandiflora
Cagra.3807s0058 2.0kb downstream 2.0kb downstream 3593 true Scaffold3807: 213454-217046 Capsella grandiflora
Cagra.3807s0058 2.0kb downstream 2.0kb downstream 2000 false Scaffold3807: 215047-217046 Capsella grandiflora
Cagra.3807s0058 5.0kb upstream 5.0kb upstream 6593 true Scaffold3807: 208454-215046 Capsella grandiflora
Cagra.3807s0058 5.0kb upstream 5.0kb upstream 5000 false Scaffold3807: 208454-213453 Capsella grandiflora
Cagra.3807s0058 5.0kb downstream 5.0kb downstream 6593 true Scaffold3807: 213454-220046 Capsella grandiflora
Cagra.3807s0058 5.0kb downstream 5.0kb downstream 5000 false Scaffold3807: 215047-220046 Capsella grandiflora
Cagra.3807s0058 10.0kb upstream 10.0kb upstream 11593 true Scaffold3807: 203454-215046 Capsella grandiflora
Cagra.3807s0058 10.0kb upstream 10.0kb upstream 10000 false Scaffold3807: 203454-213453 Capsella grandiflora
Cagra.3807s0058 10.0kb downstream 10.0kb downstream 11593 true Scaffold3807: 213454-225046 Capsella grandiflora
Cagra.3807s0058 10.0kb downstream 10.0kb downstream 10000 false Scaffold3807: 215047-225046 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379433 5261 Brassicaceae View MSA
123838768 5264 Brassicales-Malvales View MSA
124342773 5266 SBM View MSA
124240030 5268 Malvidae View MSA
124063282 5270 Rosid View MSA
123740898 5271 Pentapetalae View MSA
122792011 5272 Eudicot View MSA
122046042 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain