Gene : Cagra.3823s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR13169:SF4 - MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1-RELATED Genomic Order:  2
Name:  ? Cagra.3823s0002 Secondary Identifier:  ? PAC:28913838
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3823s0002 0.5kb upstream 0.5kb upstream 2308 true Scaffold3823: 1731-4038 Capsella grandiflora
Cagra.3823s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold3823: 3539-4038 Capsella grandiflora
Cagra.3823s0002 0.5kb downstream 0.5kb downstream 2308 true Scaffold3823: 1231-3538 Capsella grandiflora
Cagra.3823s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold3823: 1231-1730 Capsella grandiflora
Cagra.3823s0002 1.0kb upstream 1.0kb upstream 2808 true Scaffold3823: 1731-4538 Capsella grandiflora
Cagra.3823s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold3823: 3539-4538 Capsella grandiflora
Cagra.3823s0002 1.0kb downstream 1.0kb downstream 2808 true Scaffold3823: 731-3538 Capsella grandiflora
Cagra.3823s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold3823: 731-1730 Capsella grandiflora
Cagra.3823s0002 2.0kb upstream 2.0kb upstream 3808 true Scaffold3823: 1731-5538 Capsella grandiflora
Cagra.3823s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold3823: 3539-5538 Capsella grandiflora
Cagra.3823s0002 2.0kb downstream 2.0kb downstream 3538 true Scaffold3823: 1-3538 Capsella grandiflora
Cagra.3823s0002 2.0kb downstream 2.0kb downstream 1730 false Scaffold3823: 1-1730 Capsella grandiflora
Cagra.3823s0002 5.0kb upstream 5.0kb upstream 6808 true Scaffold3823: 1731-8538 Capsella grandiflora
Cagra.3823s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold3823: 3539-8538 Capsella grandiflora
Cagra.3823s0002 5.0kb downstream 5.0kb downstream 3538 true Scaffold3823: 1-3538 Capsella grandiflora
Cagra.3823s0002 5.0kb downstream 5.0kb downstream 1730 false Scaffold3823: 1-1730 Capsella grandiflora
Cagra.3823s0002 10.0kb upstream 10.0kb upstream 11808 true Scaffold3823: 1731-13538 Capsella grandiflora
Cagra.3823s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold3823: 3539-13538 Capsella grandiflora
Cagra.3823s0002 10.0kb downstream 10.0kb downstream 3538 true Scaffold3823: 1-3538 Capsella grandiflora
Cagra.3823s0002 10.0kb downstream 10.0kb downstream 1730 false Scaffold3823: 1-1730 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361809 5261 Brassicaceae View MSA
123798252 5264 Brassicales-Malvales View MSA
124295919 5266 SBM View MSA
124254148 5268 Malvidae View MSA
124063015 5270 Rosid View MSA
123741686 5271 Pentapetalae View MSA
122788977 5272 Eudicot View MSA
122050739 5273 Angiosperm View MSA
121344338 5274 Embryophyte View MSA
123427741 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain