Gene : Cagra.3823s0025 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31741:SF17 - O-FUCOSYLTRANSFERASE-LIKE PROTEIN Genomic Order:  25
Name:  ? Cagra.3823s0025 Secondary Identifier:  ? PAC:28913836
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3823s0025 0.5kb upstream 0.5kb upstream 3735 true Scaffold3823: 77344-81078 Capsella grandiflora
Cagra.3823s0025 0.5kb upstream 0.5kb upstream 500 false Scaffold3823: 80579-81078 Capsella grandiflora
Cagra.3823s0025 0.5kb downstream 0.5kb downstream 3735 true Scaffold3823: 76844-80578 Capsella grandiflora
Cagra.3823s0025 0.5kb downstream 0.5kb downstream 500 false Scaffold3823: 76844-77343 Capsella grandiflora
Cagra.3823s0025 1.0kb upstream 1.0kb upstream 4235 true Scaffold3823: 77344-81578 Capsella grandiflora
Cagra.3823s0025 1.0kb upstream 1.0kb upstream 1000 false Scaffold3823: 80579-81578 Capsella grandiflora
Cagra.3823s0025 1.0kb downstream 1.0kb downstream 4235 true Scaffold3823: 76344-80578 Capsella grandiflora
Cagra.3823s0025 1.0kb downstream 1.0kb downstream 1000 false Scaffold3823: 76344-77343 Capsella grandiflora
Cagra.3823s0025 2.0kb upstream 2.0kb upstream 5235 true Scaffold3823: 77344-82578 Capsella grandiflora
Cagra.3823s0025 2.0kb upstream 2.0kb upstream 2000 false Scaffold3823: 80579-82578 Capsella grandiflora
Cagra.3823s0025 2.0kb downstream 2.0kb downstream 5235 true Scaffold3823: 75344-80578 Capsella grandiflora
Cagra.3823s0025 2.0kb downstream 2.0kb downstream 2000 false Scaffold3823: 75344-77343 Capsella grandiflora
Cagra.3823s0025 5.0kb upstream 5.0kb upstream 8235 true Scaffold3823: 77344-85578 Capsella grandiflora
Cagra.3823s0025 5.0kb upstream 5.0kb upstream 5000 false Scaffold3823: 80579-85578 Capsella grandiflora
Cagra.3823s0025 5.0kb downstream 5.0kb downstream 8235 true Scaffold3823: 72344-80578 Capsella grandiflora
Cagra.3823s0025 5.0kb downstream 5.0kb downstream 5000 false Scaffold3823: 72344-77343 Capsella grandiflora
Cagra.3823s0025 10.0kb upstream 10.0kb upstream 13235 true Scaffold3823: 77344-90578 Capsella grandiflora
Cagra.3823s0025 10.0kb upstream 10.0kb upstream 10000 false Scaffold3823: 80579-90578 Capsella grandiflora
Cagra.3823s0025 10.0kb downstream 10.0kb downstream 13235 true Scaffold3823: 67344-80578 Capsella grandiflora
Cagra.3823s0025 10.0kb downstream 10.0kb downstream 10000 false Scaffold3823: 67344-77343 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361010 5261 Brassicaceae View MSA
123798083 5264 Brassicales-Malvales View MSA
124295761 5266 SBM View MSA
124148110 5268 Malvidae View MSA
124069771 5270 Rosid View MSA
123749174 5271 Pentapetalae View MSA
122786787 5272 Eudicot View MSA
122050382 5273 Angiosperm View MSA
121348832 5274 Embryophyte View MSA
123381034 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain