Gene : Cagra.3829s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23089:SF7 - HIT FAMILY PROTEIN 1 Genomic Order:  1
Name:  ? Cagra.3829s0001 Secondary Identifier:  ? PAC:28908841
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3829s0001 0.5kb upstream 0.5kb upstream 1948 true Scaffold3829: 38-1985 Capsella grandiflora
Cagra.3829s0001 0.5kb upstream 0.5kb upstream 34 false Scaffold3829: 1952-1985 Capsella grandiflora
Cagra.3829s0001 0.5kb downstream 0.5kb downstream 1951 true Scaffold3829: 1-1951 Capsella grandiflora
Cagra.3829s0001 0.5kb downstream 0.5kb downstream 37 false Scaffold3829: 1-37 Capsella grandiflora
Cagra.3829s0001 1.0kb upstream 1.0kb upstream 1948 true Scaffold3829: 38-1985 Capsella grandiflora
Cagra.3829s0001 1.0kb upstream 1.0kb upstream 34 false Scaffold3829: 1952-1985 Capsella grandiflora
Cagra.3829s0001 1.0kb downstream 1.0kb downstream 1951 true Scaffold3829: 1-1951 Capsella grandiflora
Cagra.3829s0001 1.0kb downstream 1.0kb downstream 37 false Scaffold3829: 1-37 Capsella grandiflora
Cagra.3829s0001 2.0kb upstream 2.0kb upstream 1948 true Scaffold3829: 38-1985 Capsella grandiflora
Cagra.3829s0001 2.0kb upstream 2.0kb upstream 34 false Scaffold3829: 1952-1985 Capsella grandiflora
Cagra.3829s0001 2.0kb downstream 2.0kb downstream 1951 true Scaffold3829: 1-1951 Capsella grandiflora
Cagra.3829s0001 2.0kb downstream 2.0kb downstream 37 false Scaffold3829: 1-37 Capsella grandiflora
Cagra.3829s0001 5.0kb upstream 5.0kb upstream 1948 true Scaffold3829: 38-1985 Capsella grandiflora
Cagra.3829s0001 5.0kb upstream 5.0kb upstream 34 false Scaffold3829: 1952-1985 Capsella grandiflora
Cagra.3829s0001 5.0kb downstream 5.0kb downstream 1951 true Scaffold3829: 1-1951 Capsella grandiflora
Cagra.3829s0001 5.0kb downstream 5.0kb downstream 37 false Scaffold3829: 1-37 Capsella grandiflora
Cagra.3829s0001 10.0kb upstream 10.0kb upstream 1948 true Scaffold3829: 38-1985 Capsella grandiflora
Cagra.3829s0001 10.0kb upstream 10.0kb upstream 34 false Scaffold3829: 1952-1985 Capsella grandiflora
Cagra.3829s0001 10.0kb downstream 10.0kb downstream 1951 true Scaffold3829: 1-1951 Capsella grandiflora
Cagra.3829s0001 10.0kb downstream 10.0kb downstream 37 false Scaffold3829: 1-37 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366357 5261 Brassicaceae View MSA
123839623 5264 Brassicales-Malvales View MSA
124340837 5266 SBM View MSA
124239363 5268 Malvidae View MSA
124050328 5270 Rosid View MSA
123747723 5271 Pentapetalae View MSA
122788071 5272 Eudicot View MSA
122049116 5273 Angiosperm View MSA
121311254 5274 Embryophyte View MSA
123425482 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain