Gene : Cagra.3834s0003 C. grandiflora v1.1
Defline:  (1 of 5) PF05757 - Oxygen evolving enhancer protein 3 (PsbQ) (PsbQ) Genomic Order:  3
Name:  ? Cagra.3834s0003 Secondary Identifier:  ? PAC:28903907
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3834s0003 0.5kb upstream 0.5kb upstream 1840 true Scaffold3834: 6627-8466 Capsella grandiflora
Cagra.3834s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold3834: 7967-8466 Capsella grandiflora
Cagra.3834s0003 0.5kb downstream 0.5kb downstream 1840 true Scaffold3834: 6127-7966 Capsella grandiflora
Cagra.3834s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold3834: 6127-6626 Capsella grandiflora
Cagra.3834s0003 1.0kb upstream 1.0kb upstream 2340 true Scaffold3834: 6627-8966 Capsella grandiflora
Cagra.3834s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold3834: 7967-8966 Capsella grandiflora
Cagra.3834s0003 1.0kb downstream 1.0kb downstream 2340 true Scaffold3834: 5627-7966 Capsella grandiflora
Cagra.3834s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold3834: 5627-6626 Capsella grandiflora
Cagra.3834s0003 2.0kb upstream 2.0kb upstream 3340 true Scaffold3834: 6627-9966 Capsella grandiflora
Cagra.3834s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold3834: 7967-9966 Capsella grandiflora
Cagra.3834s0003 2.0kb downstream 2.0kb downstream 3340 true Scaffold3834: 4627-7966 Capsella grandiflora
Cagra.3834s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold3834: 4627-6626 Capsella grandiflora
Cagra.3834s0003 5.0kb upstream 5.0kb upstream 6340 true Scaffold3834: 6627-12966 Capsella grandiflora
Cagra.3834s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold3834: 7967-12966 Capsella grandiflora
Cagra.3834s0003 5.0kb downstream 5.0kb downstream 6340 true Scaffold3834: 1627-7966 Capsella grandiflora
Cagra.3834s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold3834: 1627-6626 Capsella grandiflora
Cagra.3834s0003 10.0kb upstream 10.0kb upstream 11340 true Scaffold3834: 6627-17966 Capsella grandiflora
Cagra.3834s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold3834: 7967-17966 Capsella grandiflora
Cagra.3834s0003 10.0kb downstream 10.0kb downstream 7966 true Scaffold3834: 1-7966 Capsella grandiflora
Cagra.3834s0003 10.0kb downstream 10.0kb downstream 6626 false Scaffold3834: 1-6626 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362563 5261 Brassicaceae View MSA
123840238 5264 Brassicales-Malvales View MSA
124344714 5266 SBM View MSA
124244054 5268 Malvidae View MSA
124068012 5270 Rosid View MSA
123738573 5271 Pentapetalae View MSA
122791762 5272 Eudicot View MSA
122049164 5273 Angiosperm View MSA
121311275 5274 Embryophyte View MSA
123348590 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain