Gene : Cagra.3839s0005 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10302:SF6 - SINGLE-STRANDED DNA-BINDING PROTEIN, MITOCHONDRIAL Genomic Order:  5
Name:  ? Cagra.3839s0005 Secondary Identifier:  ? PAC:28909433
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3839s0005 0.5kb upstream 0.5kb upstream 2254 true Scaffold3839: 17211-19464 Capsella grandiflora
Cagra.3839s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold3839: 17211-17710 Capsella grandiflora
Cagra.3839s0005 0.5kb downstream 0.5kb downstream 2254 true Scaffold3839: 17711-19964 Capsella grandiflora
Cagra.3839s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold3839: 19465-19964 Capsella grandiflora
Cagra.3839s0005 1.0kb upstream 1.0kb upstream 2754 true Scaffold3839: 16711-19464 Capsella grandiflora
Cagra.3839s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold3839: 16711-17710 Capsella grandiflora
Cagra.3839s0005 1.0kb downstream 1.0kb downstream 2754 true Scaffold3839: 17711-20464 Capsella grandiflora
Cagra.3839s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold3839: 19465-20464 Capsella grandiflora
Cagra.3839s0005 2.0kb upstream 2.0kb upstream 3754 true Scaffold3839: 15711-19464 Capsella grandiflora
Cagra.3839s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold3839: 15711-17710 Capsella grandiflora
Cagra.3839s0005 2.0kb downstream 2.0kb downstream 3754 true Scaffold3839: 17711-21464 Capsella grandiflora
Cagra.3839s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold3839: 19465-21464 Capsella grandiflora
Cagra.3839s0005 5.0kb upstream 5.0kb upstream 6754 true Scaffold3839: 12711-19464 Capsella grandiflora
Cagra.3839s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold3839: 12711-17710 Capsella grandiflora
Cagra.3839s0005 5.0kb downstream 5.0kb downstream 6754 true Scaffold3839: 17711-24464 Capsella grandiflora
Cagra.3839s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold3839: 19465-24464 Capsella grandiflora
Cagra.3839s0005 10.0kb upstream 10.0kb upstream 11754 true Scaffold3839: 7711-19464 Capsella grandiflora
Cagra.3839s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold3839: 7711-17710 Capsella grandiflora
Cagra.3839s0005 10.0kb downstream 10.0kb downstream 11754 true Scaffold3839: 17711-29464 Capsella grandiflora
Cagra.3839s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold3839: 19465-29464 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375092 5261 Brassicaceae View MSA
123831339 5264 Brassicales-Malvales View MSA
124344258 5266 SBM View MSA
124241151 5268 Malvidae View MSA
124067311 5270 Rosid View MSA
123743137 5271 Pentapetalae View MSA
122790596 5272 Eudicot View MSA
122047632 5273 Angiosperm View MSA
121349645 5274 Embryophyte View MSA
123381385 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain