Gene : Cagra.3782s0020 C. grandiflora v1.1
Defline:  (1 of 31) KOG1947 - Leucine rich repeat proteins, some proteins contain F-box Genomic Order:  20
Name:  ? Cagra.3782s0020 Secondary Identifier:  ? PAC:28902715
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3782s0020 0.5kb upstream 0.5kb upstream 2225 true Scaffold3782: 66038-68262 Capsella grandiflora
Cagra.3782s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold3782: 67763-68262 Capsella grandiflora
Cagra.3782s0020 0.5kb downstream 0.5kb downstream 2225 true Scaffold3782: 65538-67762 Capsella grandiflora
Cagra.3782s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold3782: 65538-66037 Capsella grandiflora
Cagra.3782s0020 1.0kb upstream 1.0kb upstream 2725 true Scaffold3782: 66038-68762 Capsella grandiflora
Cagra.3782s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold3782: 67763-68762 Capsella grandiflora
Cagra.3782s0020 1.0kb downstream 1.0kb downstream 2725 true Scaffold3782: 65038-67762 Capsella grandiflora
Cagra.3782s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold3782: 65038-66037 Capsella grandiflora
Cagra.3782s0020 2.0kb upstream 2.0kb upstream 3725 true Scaffold3782: 66038-69762 Capsella grandiflora
Cagra.3782s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold3782: 67763-69762 Capsella grandiflora
Cagra.3782s0020 2.0kb downstream 2.0kb downstream 3725 true Scaffold3782: 64038-67762 Capsella grandiflora
Cagra.3782s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold3782: 64038-66037 Capsella grandiflora
Cagra.3782s0020 5.0kb upstream 5.0kb upstream 6725 true Scaffold3782: 66038-72762 Capsella grandiflora
Cagra.3782s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold3782: 67763-72762 Capsella grandiflora
Cagra.3782s0020 5.0kb downstream 5.0kb downstream 6725 true Scaffold3782: 61038-67762 Capsella grandiflora
Cagra.3782s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold3782: 61038-66037 Capsella grandiflora
Cagra.3782s0020 10.0kb upstream 10.0kb upstream 11725 true Scaffold3782: 66038-77762 Capsella grandiflora
Cagra.3782s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold3782: 67763-77762 Capsella grandiflora
Cagra.3782s0020 10.0kb downstream 10.0kb downstream 11725 true Scaffold3782: 56038-67762 Capsella grandiflora
Cagra.3782s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold3782: 56038-66037 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343700 5261 Brassicaceae View MSA
123783816 5264 Brassicales-Malvales View MSA
124282029 5266 SBM View MSA
124136692 5268 Malvidae View MSA
123864510 5270 Rosid View MSA
123449814 5271 Pentapetalae View MSA
122485343 5272 Eudicot View MSA
122050086 5273 Angiosperm View MSA
123428966 5275 Viridiplantae View MSA
121349716 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain