Gene : Cagra.3784s0003 C. grandiflora v1.1
Defline:  (1 of 5) PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Genomic Order:  3
Name:  ? Cagra.3784s0003 Secondary Identifier:  ? PAC:28913527
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3784s0003 0.5kb upstream 0.5kb upstream 1817 true Scaffold3784: 9442-11258 Capsella grandiflora
Cagra.3784s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold3784: 10759-11258 Capsella grandiflora
Cagra.3784s0003 0.5kb downstream 0.5kb downstream 1817 true Scaffold3784: 8942-10758 Capsella grandiflora
Cagra.3784s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold3784: 8942-9441 Capsella grandiflora
Cagra.3784s0003 1.0kb upstream 1.0kb upstream 2317 true Scaffold3784: 9442-11758 Capsella grandiflora
Cagra.3784s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold3784: 10759-11758 Capsella grandiflora
Cagra.3784s0003 1.0kb downstream 1.0kb downstream 2317 true Scaffold3784: 8442-10758 Capsella grandiflora
Cagra.3784s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold3784: 8442-9441 Capsella grandiflora
Cagra.3784s0003 2.0kb upstream 2.0kb upstream 2764 true Scaffold3784: 9442-12205 Capsella grandiflora
Cagra.3784s0003 2.0kb upstream 2.0kb upstream 1447 false Scaffold3784: 10759-12205 Capsella grandiflora
Cagra.3784s0003 2.0kb downstream 2.0kb downstream 3317 true Scaffold3784: 7442-10758 Capsella grandiflora
Cagra.3784s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold3784: 7442-9441 Capsella grandiflora
Cagra.3784s0003 5.0kb upstream 5.0kb upstream 2764 true Scaffold3784: 9442-12205 Capsella grandiflora
Cagra.3784s0003 5.0kb upstream 5.0kb upstream 1447 false Scaffold3784: 10759-12205 Capsella grandiflora
Cagra.3784s0003 5.0kb downstream 5.0kb downstream 6317 true Scaffold3784: 4442-10758 Capsella grandiflora
Cagra.3784s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold3784: 4442-9441 Capsella grandiflora
Cagra.3784s0003 10.0kb upstream 10.0kb upstream 2764 true Scaffold3784: 9442-12205 Capsella grandiflora
Cagra.3784s0003 10.0kb upstream 10.0kb upstream 1447 false Scaffold3784: 10759-12205 Capsella grandiflora
Cagra.3784s0003 10.0kb downstream 10.0kb downstream 10758 true Scaffold3784: 1-10758 Capsella grandiflora
Cagra.3784s0003 10.0kb downstream 10.0kb downstream 9441 false Scaffold3784: 1-9441 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375383 5261 Brassicaceae View MSA
123800944 5264 Brassicales-Malvales View MSA
124298299 5266 SBM View MSA
124149972 5268 Malvidae View MSA
124051795 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain