Gene : Cagra.3790s0010 C. grandiflora v1.1
Defline:  (1 of 9) PF00564//PF02042 - PB1 domain (PB1) // RWP-RK domain (RWP-RK) Genomic Order:  10
Name:  ? Cagra.3790s0010 Secondary Identifier:  ? PAC:28908034
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3790s0010 0.5kb upstream 0.5kb upstream 3905 true Scaffold3790: 37200-41104 Capsella grandiflora
Cagra.3790s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold3790: 40605-41104 Capsella grandiflora
Cagra.3790s0010 0.5kb downstream 0.5kb downstream 3905 true Scaffold3790: 36700-40604 Capsella grandiflora
Cagra.3790s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold3790: 36700-37199 Capsella grandiflora
Cagra.3790s0010 1.0kb upstream 1.0kb upstream 4405 true Scaffold3790: 37200-41604 Capsella grandiflora
Cagra.3790s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold3790: 40605-41604 Capsella grandiflora
Cagra.3790s0010 1.0kb downstream 1.0kb downstream 4405 true Scaffold3790: 36200-40604 Capsella grandiflora
Cagra.3790s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold3790: 36200-37199 Capsella grandiflora
Cagra.3790s0010 2.0kb upstream 2.0kb upstream 5405 true Scaffold3790: 37200-42604 Capsella grandiflora
Cagra.3790s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold3790: 40605-42604 Capsella grandiflora
Cagra.3790s0010 2.0kb downstream 2.0kb downstream 5405 true Scaffold3790: 35200-40604 Capsella grandiflora
Cagra.3790s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold3790: 35200-37199 Capsella grandiflora
Cagra.3790s0010 5.0kb upstream 5.0kb upstream 8405 true Scaffold3790: 37200-45604 Capsella grandiflora
Cagra.3790s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold3790: 40605-45604 Capsella grandiflora
Cagra.3790s0010 5.0kb downstream 5.0kb downstream 8405 true Scaffold3790: 32200-40604 Capsella grandiflora
Cagra.3790s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold3790: 32200-37199 Capsella grandiflora
Cagra.3790s0010 10.0kb upstream 10.0kb upstream 13405 true Scaffold3790: 37200-50604 Capsella grandiflora
Cagra.3790s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold3790: 40605-50604 Capsella grandiflora
Cagra.3790s0010 10.0kb downstream 10.0kb downstream 13405 true Scaffold3790: 27200-40604 Capsella grandiflora
Cagra.3790s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold3790: 27200-37199 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040942 5273 Angiosperm View MSA
122366717 5261 Brassicaceae View MSA
123799231 5264 Brassicales-Malvales View MSA
124296777 5266 SBM View MSA
124148834 5268 Malvidae View MSA
123874754 5270 Rosid View MSA
123458682 5271 Pentapetalae View MSA
122494082 5272 Eudicot View MSA
121350940 5274 Embryophyte View MSA
123428170 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain