Gene : Cagra.3790s0011 C. grandiflora v1.1
Defline:  (1 of 3) PTHR12387 - 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 8 Genomic Order:  11
Name:  ? Cagra.3790s0011 Secondary Identifier:  ? PAC:28908024
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3790s0011 0.5kb upstream 0.5kb upstream 1234 true Scaffold3790: 41935-43168 Capsella grandiflora
Cagra.3790s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold3790: 42669-43168 Capsella grandiflora
Cagra.3790s0011 0.5kb downstream 0.5kb downstream 1234 true Scaffold3790: 41435-42668 Capsella grandiflora
Cagra.3790s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold3790: 41435-41934 Capsella grandiflora
Cagra.3790s0011 1.0kb upstream 1.0kb upstream 1734 true Scaffold3790: 41935-43668 Capsella grandiflora
Cagra.3790s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold3790: 42669-43668 Capsella grandiflora
Cagra.3790s0011 1.0kb downstream 1.0kb downstream 1734 true Scaffold3790: 40935-42668 Capsella grandiflora
Cagra.3790s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold3790: 40935-41934 Capsella grandiflora
Cagra.3790s0011 2.0kb upstream 2.0kb upstream 2734 true Scaffold3790: 41935-44668 Capsella grandiflora
Cagra.3790s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold3790: 42669-44668 Capsella grandiflora
Cagra.3790s0011 2.0kb downstream 2.0kb downstream 2734 true Scaffold3790: 39935-42668 Capsella grandiflora
Cagra.3790s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold3790: 39935-41934 Capsella grandiflora
Cagra.3790s0011 5.0kb upstream 5.0kb upstream 5734 true Scaffold3790: 41935-47668 Capsella grandiflora
Cagra.3790s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold3790: 42669-47668 Capsella grandiflora
Cagra.3790s0011 5.0kb downstream 5.0kb downstream 5734 true Scaffold3790: 36935-42668 Capsella grandiflora
Cagra.3790s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold3790: 36935-41934 Capsella grandiflora
Cagra.3790s0011 10.0kb upstream 10.0kb upstream 10734 true Scaffold3790: 41935-52668 Capsella grandiflora
Cagra.3790s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold3790: 42669-52668 Capsella grandiflora
Cagra.3790s0011 10.0kb downstream 10.0kb downstream 10734 true Scaffold3790: 31935-42668 Capsella grandiflora
Cagra.3790s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold3790: 31935-41934 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121496590 5273 Angiosperm Singleton cluster - no MSA
122333630 5261 Brassicaceae Singleton cluster - no MSA
123774554 5264 Brassicales-Malvales Singleton cluster - no MSA
124272988 5266 SBM Singleton cluster - no MSA
124128702 5268 Malvidae Singleton cluster - no MSA
123857370 5270 Rosid Singleton cluster - no MSA
123443193 5271 Pentapetalae Singleton cluster - no MSA
122478760 5272 Eudicot Singleton cluster - no MSA
120769951 5274 Embryophyte Singleton cluster - no MSA
122812319 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain