Gene : Cagra.3793s0006 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31669:SF38 - PROTEIN FAR1-RELATED SEQUENCE 12-RELATED Genomic Order:  6
Name:  ? Cagra.3793s0006 Secondary Identifier:  ? PAC:28911169
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3793s0006 0.5kb upstream 0.5kb upstream 4230 true Scaffold3793: 20507-24736 Capsella grandiflora
Cagra.3793s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold3793: 20507-21006 Capsella grandiflora
Cagra.3793s0006 0.5kb downstream 0.5kb downstream 4230 true Scaffold3793: 21007-25236 Capsella grandiflora
Cagra.3793s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold3793: 24737-25236 Capsella grandiflora
Cagra.3793s0006 1.0kb upstream 1.0kb upstream 4730 true Scaffold3793: 20007-24736 Capsella grandiflora
Cagra.3793s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold3793: 20007-21006 Capsella grandiflora
Cagra.3793s0006 1.0kb downstream 1.0kb downstream 4730 true Scaffold3793: 21007-25736 Capsella grandiflora
Cagra.3793s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold3793: 24737-25736 Capsella grandiflora
Cagra.3793s0006 2.0kb upstream 2.0kb upstream 5730 true Scaffold3793: 19007-24736 Capsella grandiflora
Cagra.3793s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold3793: 19007-21006 Capsella grandiflora
Cagra.3793s0006 2.0kb downstream 2.0kb downstream 5730 true Scaffold3793: 21007-26736 Capsella grandiflora
Cagra.3793s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold3793: 24737-26736 Capsella grandiflora
Cagra.3793s0006 5.0kb upstream 5.0kb upstream 8730 true Scaffold3793: 16007-24736 Capsella grandiflora
Cagra.3793s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold3793: 16007-21006 Capsella grandiflora
Cagra.3793s0006 5.0kb downstream 5.0kb downstream 8730 true Scaffold3793: 21007-29736 Capsella grandiflora
Cagra.3793s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold3793: 24737-29736 Capsella grandiflora
Cagra.3793s0006 10.0kb upstream 10.0kb upstream 13730 true Scaffold3793: 11007-24736 Capsella grandiflora
Cagra.3793s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold3793: 11007-21006 Capsella grandiflora
Cagra.3793s0006 10.0kb downstream 10.0kb downstream 13730 true Scaffold3793: 21007-34736 Capsella grandiflora
Cagra.3793s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold3793: 24737-34736 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375570 5261 Brassicaceae View MSA
123840136 5264 Brassicales-Malvales View MSA
124336771 5266 SBM View MSA
124238441 5268 Malvidae View MSA
124069128 5270 Rosid View MSA
123739039 5271 Pentapetalae View MSA
122769944 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain