Gene : Cagra.3802s0010 C. grandiflora v1.1
Defline:  (1 of 5) PTHR31867:SF33 - EXPANSIN-A21-RELATED Genomic Order:  10
Name:  ? Cagra.3802s0010 Secondary Identifier:  ? PAC:28914852
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3802s0010 0.5kb upstream 0.5kb upstream 2130 true Scaffold3802: 32211-34340 Capsella grandiflora
Cagra.3802s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold3802: 32211-32710 Capsella grandiflora
Cagra.3802s0010 0.5kb downstream 0.5kb downstream 2130 true Scaffold3802: 32711-34840 Capsella grandiflora
Cagra.3802s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold3802: 34341-34840 Capsella grandiflora
Cagra.3802s0010 1.0kb upstream 1.0kb upstream 2630 true Scaffold3802: 31711-34340 Capsella grandiflora
Cagra.3802s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold3802: 31711-32710 Capsella grandiflora
Cagra.3802s0010 1.0kb downstream 1.0kb downstream 2630 true Scaffold3802: 32711-35340 Capsella grandiflora
Cagra.3802s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold3802: 34341-35340 Capsella grandiflora
Cagra.3802s0010 2.0kb upstream 2.0kb upstream 3630 true Scaffold3802: 30711-34340 Capsella grandiflora
Cagra.3802s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold3802: 30711-32710 Capsella grandiflora
Cagra.3802s0010 2.0kb downstream 2.0kb downstream 3630 true Scaffold3802: 32711-36340 Capsella grandiflora
Cagra.3802s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold3802: 34341-36340 Capsella grandiflora
Cagra.3802s0010 5.0kb upstream 5.0kb upstream 6630 true Scaffold3802: 27711-34340 Capsella grandiflora
Cagra.3802s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold3802: 27711-32710 Capsella grandiflora
Cagra.3802s0010 5.0kb downstream 5.0kb downstream 4174 true Scaffold3802: 32711-36884 Capsella grandiflora
Cagra.3802s0010 5.0kb downstream 5.0kb downstream 2544 false Scaffold3802: 34341-36884 Capsella grandiflora
Cagra.3802s0010 10.0kb upstream 10.0kb upstream 11630 true Scaffold3802: 22711-34340 Capsella grandiflora
Cagra.3802s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold3802: 22711-32710 Capsella grandiflora
Cagra.3802s0010 10.0kb downstream 10.0kb downstream 4174 true Scaffold3802: 32711-36884 Capsella grandiflora
Cagra.3802s0010 10.0kb downstream 10.0kb downstream 2544 false Scaffold3802: 34341-36884 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380193 5261 Brassicaceae View MSA
123838557 5264 Brassicales-Malvales View MSA
124341019 5266 SBM View MSA
124248969 5268 Malvidae View MSA
124064025 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain