Gene : Cagra.3807s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11599:SF4 - PROTEASOME SUBUNIT BETA TYPE Genomic Order:  2
Name:  ? Cagra.3807s0002 Secondary Identifier:  ? PAC:28899144
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3807s0002 0.5kb upstream 0.5kb upstream 2807 true Scaffold3807: 6522-9328 Capsella grandiflora
Cagra.3807s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold3807: 6522-7021 Capsella grandiflora
Cagra.3807s0002 0.5kb downstream 0.5kb downstream 2807 true Scaffold3807: 7022-9828 Capsella grandiflora
Cagra.3807s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold3807: 9329-9828 Capsella grandiflora
Cagra.3807s0002 1.0kb upstream 1.0kb upstream 3307 true Scaffold3807: 6022-9328 Capsella grandiflora
Cagra.3807s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold3807: 6022-7021 Capsella grandiflora
Cagra.3807s0002 1.0kb downstream 1.0kb downstream 3307 true Scaffold3807: 7022-10328 Capsella grandiflora
Cagra.3807s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold3807: 9329-10328 Capsella grandiflora
Cagra.3807s0002 2.0kb upstream 2.0kb upstream 4307 true Scaffold3807: 5022-9328 Capsella grandiflora
Cagra.3807s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold3807: 5022-7021 Capsella grandiflora
Cagra.3807s0002 2.0kb downstream 2.0kb downstream 4307 true Scaffold3807: 7022-11328 Capsella grandiflora
Cagra.3807s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold3807: 9329-11328 Capsella grandiflora
Cagra.3807s0002 5.0kb upstream 5.0kb upstream 7307 true Scaffold3807: 2022-9328 Capsella grandiflora
Cagra.3807s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold3807: 2022-7021 Capsella grandiflora
Cagra.3807s0002 5.0kb downstream 5.0kb downstream 7307 true Scaffold3807: 7022-14328 Capsella grandiflora
Cagra.3807s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold3807: 9329-14328 Capsella grandiflora
Cagra.3807s0002 10.0kb upstream 10.0kb upstream 9328 true Scaffold3807: 1-9328 Capsella grandiflora
Cagra.3807s0002 10.0kb upstream 10.0kb upstream 7021 false Scaffold3807: 1-7021 Capsella grandiflora
Cagra.3807s0002 10.0kb downstream 10.0kb downstream 12307 true Scaffold3807: 7022-19328 Capsella grandiflora
Cagra.3807s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold3807: 9329-19328 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377450 5261 Brassicaceae View MSA
123835420 5264 Brassicales-Malvales View MSA
124338550 5266 SBM View MSA
124242459 5268 Malvidae View MSA
124072118 5270 Rosid View MSA
123739837 5271 Pentapetalae View MSA
122787112 5272 Eudicot View MSA
122042540 5273 Angiosperm View MSA
121348107 5274 Embryophyte View MSA
123423963 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain