Gene : Cagra.4440s0008 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24347:SF1 - PROTEIN CKK-1, ISOFORM B Genomic Order:  8
Name:  ? Cagra.4440s0008 Secondary Identifier:  ? PAC:28908262
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4440s0008 0.5kb upstream 0.5kb upstream 3686 true Scaffold4440: 40442-44127 Capsella grandiflora
Cagra.4440s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold4440: 43628-44127 Capsella grandiflora
Cagra.4440s0008 0.5kb downstream 0.5kb downstream 3686 true Scaffold4440: 39942-43627 Capsella grandiflora
Cagra.4440s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold4440: 39942-40441 Capsella grandiflora
Cagra.4440s0008 1.0kb upstream 1.0kb upstream 4186 true Scaffold4440: 40442-44627 Capsella grandiflora
Cagra.4440s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold4440: 43628-44627 Capsella grandiflora
Cagra.4440s0008 1.0kb downstream 1.0kb downstream 4186 true Scaffold4440: 39442-43627 Capsella grandiflora
Cagra.4440s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold4440: 39442-40441 Capsella grandiflora
Cagra.4440s0008 2.0kb upstream 2.0kb upstream 5186 true Scaffold4440: 40442-45627 Capsella grandiflora
Cagra.4440s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold4440: 43628-45627 Capsella grandiflora
Cagra.4440s0008 2.0kb downstream 2.0kb downstream 5186 true Scaffold4440: 38442-43627 Capsella grandiflora
Cagra.4440s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold4440: 38442-40441 Capsella grandiflora
Cagra.4440s0008 5.0kb upstream 5.0kb upstream 8186 true Scaffold4440: 40442-48627 Capsella grandiflora
Cagra.4440s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold4440: 43628-48627 Capsella grandiflora
Cagra.4440s0008 5.0kb downstream 5.0kb downstream 8186 true Scaffold4440: 35442-43627 Capsella grandiflora
Cagra.4440s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold4440: 35442-40441 Capsella grandiflora
Cagra.4440s0008 10.0kb upstream 10.0kb upstream 13186 true Scaffold4440: 40442-53627 Capsella grandiflora
Cagra.4440s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold4440: 43628-53627 Capsella grandiflora
Cagra.4440s0008 10.0kb downstream 10.0kb downstream 13186 true Scaffold4440: 30442-43627 Capsella grandiflora
Cagra.4440s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold4440: 30442-40441 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377818 5261 Brassicaceae View MSA
123836917 5264 Brassicales-Malvales View MSA
124338594 5266 SBM View MSA
124238642 5268 Malvidae View MSA
124062424 5270 Rosid View MSA
123753521 5271 Pentapetalae View MSA
122797928 5272 Eudicot View MSA
122051434 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain