Gene : Cagra.4491s0008 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22925 - GLYCOSYL HYDROLASE 43 FAMILY MEMBER Genomic Order:  8
Name:  ? Cagra.4491s0008 Secondary Identifier:  ? PAC:28895558
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4491s0008 0.5kb upstream 0.5kb upstream 2830 true Scaffold4491: 22808-25637 Capsella grandiflora
Cagra.4491s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold4491: 22808-23307 Capsella grandiflora
Cagra.4491s0008 0.5kb downstream 0.5kb downstream 2830 true Scaffold4491: 23308-26137 Capsella grandiflora
Cagra.4491s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold4491: 25638-26137 Capsella grandiflora
Cagra.4491s0008 1.0kb upstream 1.0kb upstream 3330 true Scaffold4491: 22308-25637 Capsella grandiflora
Cagra.4491s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold4491: 22308-23307 Capsella grandiflora
Cagra.4491s0008 1.0kb downstream 1.0kb downstream 3330 true Scaffold4491: 23308-26637 Capsella grandiflora
Cagra.4491s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold4491: 25638-26637 Capsella grandiflora
Cagra.4491s0008 2.0kb upstream 2.0kb upstream 4330 true Scaffold4491: 21308-25637 Capsella grandiflora
Cagra.4491s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold4491: 21308-23307 Capsella grandiflora
Cagra.4491s0008 2.0kb downstream 2.0kb downstream 4330 true Scaffold4491: 23308-27637 Capsella grandiflora
Cagra.4491s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold4491: 25638-27637 Capsella grandiflora
Cagra.4491s0008 5.0kb upstream 5.0kb upstream 7330 true Scaffold4491: 18308-25637 Capsella grandiflora
Cagra.4491s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold4491: 18308-23307 Capsella grandiflora
Cagra.4491s0008 5.0kb downstream 5.0kb downstream 7330 true Scaffold4491: 23308-30637 Capsella grandiflora
Cagra.4491s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold4491: 25638-30637 Capsella grandiflora
Cagra.4491s0008 10.0kb upstream 10.0kb upstream 12330 true Scaffold4491: 13308-25637 Capsella grandiflora
Cagra.4491s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold4491: 13308-23307 Capsella grandiflora
Cagra.4491s0008 10.0kb downstream 10.0kb downstream 12330 true Scaffold4491: 23308-35637 Capsella grandiflora
Cagra.4491s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold4491: 25638-35637 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041070 5273 Angiosperm View MSA
122362249 5261 Brassicaceae View MSA
123830768 5264 Brassicales-Malvales View MSA
124349651 5266 SBM View MSA
124237040 5268 Malvidae View MSA
124066738 5270 Rosid View MSA
123739874 5271 Pentapetalae View MSA
122796109 5272 Eudicot View MSA
121348927 5274 Embryophyte View MSA
123428159 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain