Gene : Cagra.4497s0003 C. grandiflora v1.1
Defline:  (1 of 19) PTHR33920:SF1 - THIONIN-2.1-RELATED Genomic Order:  3
Name:  ? Cagra.4497s0003 Secondary Identifier:  ? PAC:28911612
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4497s0003 0.5kb upstream 0.5kb upstream 1295 true Scaffold4497: 6156-7450 Capsella grandiflora
Cagra.4497s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold4497: 6951-7450 Capsella grandiflora
Cagra.4497s0003 0.5kb downstream 0.5kb downstream 1295 true Scaffold4497: 5656-6950 Capsella grandiflora
Cagra.4497s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold4497: 5656-6155 Capsella grandiflora
Cagra.4497s0003 1.0kb upstream 1.0kb upstream 1795 true Scaffold4497: 6156-7950 Capsella grandiflora
Cagra.4497s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold4497: 6951-7950 Capsella grandiflora
Cagra.4497s0003 1.0kb downstream 1.0kb downstream 1795 true Scaffold4497: 5156-6950 Capsella grandiflora
Cagra.4497s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold4497: 5156-6155 Capsella grandiflora
Cagra.4497s0003 2.0kb upstream 2.0kb upstream 2795 true Scaffold4497: 6156-8950 Capsella grandiflora
Cagra.4497s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold4497: 6951-8950 Capsella grandiflora
Cagra.4497s0003 2.0kb downstream 2.0kb downstream 2795 true Scaffold4497: 4156-6950 Capsella grandiflora
Cagra.4497s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold4497: 4156-6155 Capsella grandiflora
Cagra.4497s0003 5.0kb upstream 5.0kb upstream 5795 true Scaffold4497: 6156-11950 Capsella grandiflora
Cagra.4497s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold4497: 6951-11950 Capsella grandiflora
Cagra.4497s0003 5.0kb downstream 5.0kb downstream 5795 true Scaffold4497: 1156-6950 Capsella grandiflora
Cagra.4497s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold4497: 1156-6155 Capsella grandiflora
Cagra.4497s0003 10.0kb upstream 10.0kb upstream 10795 true Scaffold4497: 6156-16950 Capsella grandiflora
Cagra.4497s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold4497: 6951-16950 Capsella grandiflora
Cagra.4497s0003 10.0kb downstream 10.0kb downstream 6950 true Scaffold4497: 1-6950 Capsella grandiflora
Cagra.4497s0003 10.0kb downstream 10.0kb downstream 6155 false Scaffold4497: 1-6155 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029035 5273 Angiosperm View MSA
122381499 5261 Brassicaceae View MSA
123803275 5264 Brassicales-Malvales View MSA
124300395 5266 SBM View MSA
124151585 5268 Malvidae View MSA
123876986 5270 Rosid View MSA
123460583 5271 Pentapetalae View MSA
122797481 5272 Eudicot View MSA
121298442 5274 Embryophyte View MSA
123336415 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain