Gene : Cagra.4538s0006 C. grandiflora v1.1
Defline:  (1 of 1) PTHR30509//PTHR30509:SF7 - P-HYDROXYBENZOIC ACID EFFLUX PUMP SUBUNIT-RELATED Genomic Order:  6
Name:  ? Cagra.4538s0006 Secondary Identifier:  ? PAC:28913088
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.4538s0006 0.5kb upstream 0.5kb upstream 3639 true Scaffold4538: 27576-31214 Capsella grandiflora
Cagra.4538s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold4538: 27576-28075 Capsella grandiflora
Cagra.4538s0006 0.5kb downstream 0.5kb downstream 3639 true Scaffold4538: 28076-31714 Capsella grandiflora
Cagra.4538s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold4538: 31215-31714 Capsella grandiflora
Cagra.4538s0006 1.0kb upstream 1.0kb upstream 4139 true Scaffold4538: 27076-31214 Capsella grandiflora
Cagra.4538s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold4538: 27076-28075 Capsella grandiflora
Cagra.4538s0006 1.0kb downstream 1.0kb downstream 4139 true Scaffold4538: 28076-32214 Capsella grandiflora
Cagra.4538s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold4538: 31215-32214 Capsella grandiflora
Cagra.4538s0006 2.0kb upstream 2.0kb upstream 5139 true Scaffold4538: 26076-31214 Capsella grandiflora
Cagra.4538s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold4538: 26076-28075 Capsella grandiflora
Cagra.4538s0006 2.0kb downstream 2.0kb downstream 5139 true Scaffold4538: 28076-33214 Capsella grandiflora
Cagra.4538s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold4538: 31215-33214 Capsella grandiflora
Cagra.4538s0006 5.0kb upstream 5.0kb upstream 8139 true Scaffold4538: 23076-31214 Capsella grandiflora
Cagra.4538s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold4538: 23076-28075 Capsella grandiflora
Cagra.4538s0006 5.0kb downstream 5.0kb downstream 8139 true Scaffold4538: 28076-36214 Capsella grandiflora
Cagra.4538s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold4538: 31215-36214 Capsella grandiflora
Cagra.4538s0006 10.0kb upstream 10.0kb upstream 13139 true Scaffold4538: 18076-31214 Capsella grandiflora
Cagra.4538s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold4538: 18076-28075 Capsella grandiflora
Cagra.4538s0006 10.0kb downstream 10.0kb downstream 8196 true Scaffold4538: 28076-36271 Capsella grandiflora
Cagra.4538s0006 10.0kb downstream 10.0kb downstream 5057 false Scaffold4538: 31215-36271 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375032 5261 Brassicaceae View MSA
123828022 5264 Brassicales-Malvales View MSA
124343703 5266 SBM View MSA
124237462 5268 Malvidae View MSA
124066228 5270 Rosid View MSA
123740687 5271 Pentapetalae View MSA
122792207 5272 Eudicot View MSA
122049763 5273 Angiosperm View MSA
121311579 5274 Embryophyte View MSA
123426267 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain